Gene: CSS0043330

General Information

Structural Information

Species Camellia sinensis var. sinensis
Gene Identifier CSS0043330
Transcript Identifier CSS0043330.1
Gene Type Coding gene
Location Chr13 : 6660144-6735363 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D003161
#Genes/#Species 216/96
Phylogenetic origin

ID ORTHO05D005173
#Genes/#Species 163/96
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

tid CSS0043330.1

Descriptions

Short descriptions
Ortholog descriptions

Description PREDICTED: protein RRP5 homolog [Vitis vinifera]

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006396	ISO	PLAZA Homology (enrichment)	RNA processing	HOM05D003161
GO:0006364	ISO	PLAZA Integrative Orthology	rRNA processing	AT3G11964
GO:0009553	ISO	PLAZA Integrative Orthology	embryo sac development	AT3G11964
GO:0006397	ISO	PLAZA Homology (enrichment)	mRNA processing	HOM05D003161

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0003676	IEA	InterPro	nucleic acid binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Homology (enrichment)	nucleus	HOM05D003161
GO:0005730	ISO	PLAZA Integrative Orthology	nucleolus	AT3G11964
GO:0005886	ISO	PLAZA Integrative Orthology	plasma membrane	AT3G11964

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR011990	Tetratricopeptide-like helical domain superfamily
IPR012340	Nucleic acid-binding, OB-fold
IPR003029	S1 domain
IPR022967	RNA-binding domain, S1

Mapman id	Description
17.1.3.2.1.9	Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.assembly factor (RRP5)