Gene: SGA_v2.0_scaffold274G46506

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold274G46506
  • Transcript Identifier SGA_v2.0_scaffold274T46506
  • Gene Type Coding gene
  • Location scaffold274 : 249072-264199 : positive

Gene Family Information

  • ID HOM05D003161
  • #Genes/#Species 216/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product RNA binding
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
InterPromRNA processing
GO:0006396
IEA
InterProRNA processing
GO:0006364
ISO
PLAZA Integrative OrthologyrRNA processing AT3G11964
GO:0009553
ISO
PLAZA Integrative Orthologyembryo sac development AT3G11964

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003676
IEA
InterPronucleic acid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT3G11964
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G11964

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012340 Nucleic acid-binding, OB-fold
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR003029 S1 domain
IPR008847 Suppressor of forked
IPR003107 HAT (Half-A-TPR) repeat
IPR022967 RNA-binding domain, S1
Mapman id Description
17.1.3.2.1.9 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.assembly factor (RRP5)