Gene: vmacro22127
General Information
Structural Information
- Species Vaccinium macrocarpon
- Gene Identifier vmacro22127
- Transcript Identifier vmacro22127-RA
- Gene Type Coding gene
- Location scaffold00307_Vaccinium_macrocarpon_Stevens_v1 : 307053-322857 : positive
Gene Family Information
- ID HOM05D003161
- #Genes/#Species 216/96
- Phylogenetic origin
- ID ORTHO05D005173
- #Genes/#Species 163/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id vmacro22127_Vaccinium_macrocarpon_Stevens_v1
Descriptions
- Description Similar to RRP5: rRNA biogenesis protein RRP5 (Arabidopsis thaliana OX=3702)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006396 | ISO | PLAZA Homology (enrichment) | RNA processing | HOM05D003161 |
| GO:0006397 | ISO | PLAZA Homology (enrichment) | mRNA processing | HOM05D003161 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005515 | ISO | PLAZA Homology (enrichment) | protein binding | HOM05D003161 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Homology (enrichment) | nucleus | HOM05D003161 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 17.1.3.2.1.9 | Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.assembly factor (RRP5) |
| 26.9.2.1.1 | External stimuli response.pathogen.effector-triggered immunity (ETI) network.TNL-mediated effector-triggered immunity.effector receptor (NLR) |