Gene: Cc06_g23250

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc06_g23250
  • Transcript Identifier Cc06_g23250.1
  • Gene Type Coding gene
  • Location chr6 : 36210802-36239430 : negative

Gene Family Information

  • ID HOM05D003161
  • #Genes/#Species 216/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB F6HLF1
  • UniProtKB Q6NS46
  • UniProtKB Q9LHM6
  • UniProtKB Q14690
  • UniProtKB F4J8K6
  • UniProtKB O74835
  • id GSCOCG00040598001

Descriptions

  • Description Putative Protein RRP5 homolog
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
InterPromRNA processing
GO:0006396
IEA
InterProRNA processing
GO:0006364
ISO
PLAZA Integrative OrthologyrRNA processing AT3G11964
GO:0009553
ISO
PLAZA Integrative Orthologyembryo sac development AT3G11964

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003676
IEA
InterPronucleic acid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT3G11964
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G11964

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR022967 RNA-binding domain, S1
IPR012340 Nucleic acid-binding, OB-fold
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR008847 Suppressor of forked
IPR003029 S1 domain
IPR003107 HAT (Half-A-TPR) repeat
Mapman id Description
17.1.3.2.1.9 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.assembly factor (RRP5)