Gene: Nitab4.5_0001364g0070

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0001364g0070
  • Transcript Identifier Nitab4.5_0001364g0070.1
  • Gene Type Coding gene
  • Location Nitab4.5_0001364 : 200811-230745 : negative

Gene Family Information

  • ID HOM05D003161
  • #Genes/#Species 216/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0001364g0070.1
  • SR1-identifier Nta23g12600.1

Descriptions

  • Description Nucleic acid-binding, OB-fold, Ribosomal protein S1, RNA-binding domain, Suppressor of forked, Tetratricopeptide-like helical, RNA-processing protein, HAT helix, RNA-binding domain, S1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
InterProRNA processing
GO:0006397
IEA
InterPromRNA processing
GO:0006364
ISO
PLAZA Integrative OrthologyrRNA processing AT3G11964
GO:0009553
ISO
PLAZA Integrative Orthologyembryo sac development AT3G11964

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003676
IEA
InterPronucleic acid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT3G11964
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G11964

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012340 Nucleic acid-binding, OB-fold
IPR003107 HAT (Half-A-TPR) repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR008847 Suppressor of forked
IPR003029 S1 domain
IPR022967 RNA-binding domain, S1
Mapman id Description
17.1.3.2.1.9 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.assembly factor (RRP5)