Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p18410 Brassica napus
A07p29990 Brassica napus
A07p39050 Brassica napus
Aa31LG4G3320 Aethionema arabicum
Aa31LG7G2560 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2683 Anthoceros agrestis
Actinidia09017 Actinidia chinensis
Actinidia21737 Actinidia chinensis
Actinidia32126 Actinidia chinensis
Actinidia39124 Actinidia chinensis
Ah.01g004400 Amaranthus hybridus
Ah.10g037520 Amaranthus hybridus
Ah.16g102040 Amaranthus hybridus
AL1G30080 Arabidopsis lyrata
AL2G32780 Arabidopsis lyrata
Aqoxy3G00395 Aquilegia oxysepala
Aqoxy3G03908 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.74MAYQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SB1TJ5 Arachis hypogaea
AT1G17730 Arabidopsis thaliana
AT1G73030 Arabidopsis thaliana
ATR0584G186 Amborella trichopoda
ATR0789G029 Amborella trichopoda
ATR0827G188 Amborella trichopoda
Atru.chr1.2325 Acer truncatum
Atru.chr1.3616 Acer truncatum
Atru.chr1.3620 Acer truncatum
Atru.chr1.3622 Acer truncatum
AUR62008961 Chenopodium quinoa
AUR62014542 Chenopodium quinoa
AUR62022299 Chenopodium quinoa
AUR62023893 Chenopodium quinoa
AUR62044729 Chenopodium quinoa
BcaB05g24796 Brassica carinata
BcaC03g15439 Brassica carinata
BcaC07g36865 Brassica carinata
BcaC07g38783 Brassica carinata
BcaC08g45677 Brassica carinata
BolC2t09100H Brassica oleracea
BolC6t38550H Brassica oleracea
BolC6t39765H Brassica oleracea
BolC8t46971H Brassica oleracea
BraA02t06880Z Brassica rapa
BraA07t30637Z Brassica rapa
BraA07t31455Z Brassica rapa
C02p30490 Brassica napus
C06p34400 Brassica napus
C06p47260 Brassica napus
C08p01710 Brassica napus
C08p17130 Brassica napus
CAN.G1668.7 Capsicum annuum
CAN.G635.23 Capsicum annuum
CANSAT11G1801 Cannabis sativa
CANSAT54G2458 Cannabis sativa
CANSAT56G0642 Cannabis sativa
CANSAT64G1782 Cannabis sativa
CARHR018340 Cardamine hirsuta
CARHR066000 Cardamine hirsuta
Carub.0001s1746 Capsella rubella
Carub.0002s1979 Capsella rubella
Ca_01181_v3 Cicer arietinum L.
CBR_g789 Chara braunii
Cc04_g02220 Coffea canephora
CDE04G0664 Ceratophyllum demersum
CDE04G2657 Ceratophyllum demersum
CDE07G1114 Ceratophyllum demersum
CDE07G1441 Ceratophyllum demersum
Cfa019409 Carpinus fangiana
Ciclev10026516m.g Citrus clementina
CiPaw.11G063500 Carya illinoinensis
CiPaw.12G009300 Carya illinoinensis
ClCG07G013580 Citrullus lanatus
ClCG09G000500 Citrullus lanatus
COL.COLO4_30596 Corchorus olitorius
Cpa.g.sc131.21 Carica papaya
Cre03.g188500 Chlamydomonas reinhardtii
CsaV3_3G044060 Cucumis sativus L.
CsaV3_7G034960 Cucumis sativus L.
CSS0004778 Camellia sinensis var. sinensis
CSS0013352 Camellia sinensis var. sinensis
CSS0036477 Camellia sinensis var. sinensis
CSS0043980 Camellia sinensis var. sinensis
DCAR_016181 Daucus carota
Dinv37938 Davidia involucrata
Duzib160G0347 Durio zibethinus
Duzib192G0554 Durio zibethinus
Duzib235G0801 Durio zibethinus
ECA232G1275 Erigeron canadensis
EL10Ac2g04611 Beta vulgaris
EL10Ac9g21138 Beta vulgaris
Eucgr.F03099 Eucalyptus grandis
Eucgr.J02899 Eucalyptus grandis
FAN02G2353 Fragaria x ananassa
FAN03G2581 Fragaria x ananassa
FAN05G5210 Fragaria x ananassa
FAN09G0729 Fragaria x ananassa
FAN14G4152 Fragaria x ananassa
FAN19G0471 Fragaria x ananassa
FAN23G1676 Fragaria x ananassa
FAN26G1760 Fragaria x ananassa
FAN26G1980 Fragaria x ananassa
FAN28G0655 Fragaria x ananassa
FvH4_1g06550 Fragaria vesca
FvH4_6g32870 Fragaria vesca
Glyma.13G352200 Glycine max
Glyma.15G022600 Glycine max
Gohir.A05G133300 Gossypium hirsutum
Gohir.A06G190100 Gossypium hirsutum
Gohir.A10G062500 Gossypium hirsutum
Gohir.D05G135200 Gossypium hirsutum
Gohir.D06G198500 Gossypium hirsutum
Gohir.D10G064200 Gossypium hirsutum
Gorai.009G139000 Gossypium raimondii
Gorai.010G231400 Gossypium raimondii
Gorai.011G068200 Gossypium raimondii
GSVIVG01016898001 Vitis vinifera
HanXRQChr02g0031491 Helianthus annuus
HanXRQChr09g0275481 Helianthus annuus
Haze_07835 Corylus avellana
Haze_27680 Corylus avellana
Hma1.2p1_0388F.1_g142100 Hydrangea macrophylla
HPP92_010635 Vanilla planifolia
HPP92_016002 Vanilla planifolia
HPP92_016070 Vanilla planifolia
HPP92_018416 Vanilla planifolia
Lalb_Chr14g0372911 Lupinus albus
Lalb_Chr24g0396241 Lupinus albus
Lalb_Chr24g0396251 Lupinus albus
Lj1g0024696 Lotus japonicus
Lj5A50T64 Lonicera japonica
Lj9P516T96 Lonicera japonica
Lsat_1_v5_gn_1_36520 Lactuca sativa
Lsat_1_v5_gn_4_96201 Lactuca sativa
Lsat_1_v5_gn_6_113321 Lactuca sativa
Manes.04G137000 Manihot esculenta
Manes.11G029300 Manihot esculenta
Mapoly0004s0140 Marchantia polymorpha
Mapoly0084s0027 Marchantia polymorpha
MBI04_g06214_MAGBIO Magnolia biondii
MBI16_g03094_MAGBIO Magnolia biondii
MCO04G272 Micromonas commoda
MD09G1196800 Malus domestica
MD10G1056000 Malus domestica
MD10G1161500 Malus domestica
MD12G1147400 Malus domestica
MD17G1178300 Malus domestica
Medtr2g100420 Medicago truncatula
MELO3C013034.2 Cucumis melo
MELO3C024407.2 Cucumis melo
Migut.I01000 Erythranthe guttata
MSTRG.22606 Avicennia marina
Nitab4.5_0000300g0020 Nicotiana tabacum
Nitab4.5_0002656g0020 Nicotiana tabacum
Nitab4.5_0004848g0110 Nicotiana tabacum
Nitab4.5_0018555g0010 Nicotiana tabacum
Nn1g04836 Nelumbo nucifera
Nn2g14266 Nelumbo nucifera
Nn3g16931 Nelumbo nucifera
Nn3g17723 Nelumbo nucifera
Nn4g23484 Nelumbo nucifera
Nn4g23725 Nelumbo nucifera
Nn5g29436 Nelumbo nucifera
Nn6g35399 Nelumbo nucifera
Nn8g38945 Nelumbo nucifera
Oeu001924.1 Olea europaea
Oeu016049.1 Olea europaea
Oeu045663.4 Olea europaea
Oeu052811.1 Olea europaea
Os06g0643300 Oryza sativa ssp. japonica
Peaxi162Scf00038g00126 Petunia axillaris
Peaxi162Scf00207g01136 Petunia axillaris
PGR102G0865 Punica granatum
PGR102G2722 Punica granatum
PGSC0003DMG400002596 Solanum tuberosum
PGSC0003DMG400004839 Solanum tuberosum
PGSC0003DMG400007769 Solanum tuberosum
Phvul.005G161400 Phaseolus vulgaris
Potri.001G194400 Populus trichocarpa
Potri.003G045300 Populus trichocarpa
Potri.006G158538 Populus trichocarpa
Pp3c10_20850 Physcomitrium patens
Pp3c20_11050 Physcomitrium patens
Pp3c20_20650 Physcomitrium patens
Pp3c8_6470 Physcomitrium patens
PRCOL_00005395 Prasinoderma coloniale
Prupe.3G053300 Prunus persica
Psat0s2235g0080 Pisum sativum
Psat3g080200 Pisum sativum
Psat4g035160 Pisum sativum
Psat4g217760 Pisum sativum
PSO017G3072 Papaver somniferum
PSO063G5644 Papaver somniferum
PSO210G0178 Papaver somniferum
PSO210G0195 Papaver somniferum
PSO210G0356 Papaver somniferum
PSO210G1293 Papaver somniferum
PSO210G1709 Papaver somniferum
PSO210G1841 Papaver somniferum
PSO210G3597 Papaver somniferum
PSO210G3603 Papaver somniferum
PSO210G4346 Papaver somniferum
PSO210G4401 Papaver somniferum
PSO210G4971 Papaver somniferum
PSO210G5291 Papaver somniferum
PSO210G6786 Papaver somniferum
PSO210G6956 Papaver somniferum
PSO210G7177 Papaver somniferum
PSO478G3112 Papaver somniferum
PSO782G3641 Papaver somniferum
PSO832G2624 Papaver somniferum
QL04p077264 Quercus lobata
QL05p030016 Quercus lobata
QL12p008286 Quercus lobata
RcHm_v2.0_Chr2g0142211 Rosa chinensis
RcHm_v2.0_Chr2g0142261 Rosa chinensis
Rhsim08G0230600 Rhododendron simsii
Rhsim12G0204500 Rhododendron simsii
Sabra01G0135000 Salix brachista
Sabra03G0021500 Salix brachista
SalBow6G2297 Salvia bowleyana
Sc11g0008170 Simmondsia chinensis
Sc15g0000040 Simmondsia chinensis
Sed0005668 Sechium edule
Sed0010478 Sechium edule
Sed0019945 Sechium edule
SEGI_00184 Sequoiadendron giganteum
SEGI_14657 Sequoiadendron giganteum
SGA_v2.0_scaffold45G16990 Striga asiatica
SGA_v2.0_scaffold71G23750 Striga asiatica
SMO169G0308 Selaginella moellendorffii
SMO351G0609 Selaginella moellendorffii
Solyc03g121360.1 Solanum lycopersicum
Solyc06g062510.3 Solanum lycopersicum
Solyc07g048020.3 Solanum lycopersicum
Solyc08g028770.1 Solanum lycopersicum
Solyc11g061690.1 Solanum lycopersicum
Sopen02g016970 Solanum pennellii
Sopen03g040170 Solanum pennellii
Sopen06g021990 Solanum pennellii
Sp5g27990 Schrenkiella parvula
TAR371G0957 Trochodendron aralioides
TAR383G0009 Trochodendron aralioides
TAR497G0004 Trochodendron aralioides
TAR626G0998 Trochodendron aralioides
TAR629G3221 Trochodendron aralioides
TAR629G3392 Trochodendron aralioides
TAR636G2613 Trochodendron aralioides
THA.LOC104812208 Tarenaya hassleriana
Thecc.06G106700 Theobroma cacao
Thhalv10008799m.g Eutrema salsugineum
Thhalv10019148m.g Eutrema salsugineum
TPR.G37171 Trifolium pratense
TWI14G0861 Tripterygium wilfordii
TWI14G1189 Tripterygium wilfordii
TWI59G0167 Tripterygium wilfordii
unitig_0.g2869 Utricularia gibba
vmacro16997 Vaccinium macrocarpon
vmacro18827 Vaccinium macrocarpon
VMungo1080G1116 Vigna mungo
Zm00001eb275280 Zea mays
Zm00001eb275320 Zea mays
Zm00001eb275330 Zea mays
Zm00001eb387090 Zea mays

User provided reference genes

Program Settings