Gene: Potri.003G045300
General Information
Structural Information
- Species Populus trichocarpa
- Gene Identifier Potri.003G045300
- Transcript Identifier Potri.003G045300.1
- Gene Type Coding gene
- Location Chr03 : 5185279-5186085 : positive
Gene Family Information
- ID HOM05D002592
- #Genes/#Species 263/98
- Phylogenetic origin
- ID ORTHO05D003149
- #Genes/#Species 241/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Potri.003G045300.v4.1
- pacid 42787132
- synonym POPTR_0003s04000
Descriptions
- Description K12197 - charged multivesicular body protein 1 (CHMP1, VPS46, DID2)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0007034 | IEA | InterPro | vacuolar transport | |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT1G73030 |
| GO:0032509 | ISO | PLAZA Integrative Orthology | endosome transport via multivesicular body sorting pathway | AT1G73030 |
| GO:0090351 | ISO | PLAZA Integrative Orthology | seedling development | AT1G73030 |
| GO:0000578 | ISO | PLAZA Integrative Orthology | embryonic axis specification | AT1G73030 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G73030 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR005024 | Snf7 family |
| Mapman id | Description |
|---|---|
| 22.4.1.3.5 | Vesicle trafficking.endocytic trafficking.ESCRT-mediated sorting.ESCRT-III complex.associated component VPS46/CHMP1 |