Gene: Os06g0643300
General Information
Structural Information
- Species Oryza sativa ssp. japonica
- Gene Identifier Os06g0643300
- Transcript Identifier Os06t0643300-01
- Gene Type Coding gene
- Location chr06 : 26215678-26216295 : positive
Gene Family Information
- ID HOM05D002592
- #Genes/#Species 263/98
- Phylogenetic origin
- ID ORTHO05D003149
- #Genes/#Species 241/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Os06t0643300-01
- MSU-ID LOC_Os06g43590.2
- MSU-ID LOC_Os06g43590.4
- MSU-ID LOC_Os06g43590.3
- uniprot Q84VG1
Descriptions
- Description Development protein-like protein.
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015031 | IBA IEA | GOA Database | protein transport | |
| GO:0007034 | IEA | GOA Database | vacuolar transport | |
| GO:0007034 | IEA | InterPro | vacuolar transport | |
| GO:0045324 | IBA | GOA Database | late endosome to vacuole transport | |
| GO:0032509 | IBA | GOA Database | endosome transport via multivesicular body sorting pathway | |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT1G73030 |
| GO:0090351 | ISO | PLAZA Integrative Orthology | seedling development | AT1G73030 |
| GO:0000578 | ISO | PLAZA Integrative Orthology | embryonic axis specification | AT1G73030 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G73030 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010008 | IEA | GOA Database | endosome membrane | |
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005768 | IEA | GOA Database | endosome | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0000815 | IBA | GOA Database | ESCRT III complex | |
| GO:0005771 | IBA | GOA Database | multivesicular body |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR005024 | Snf7 family |
| Mapman id | Description |
|---|---|
| 22.4.1.3.5 | Vesicle trafficking.endocytic trafficking.ESCRT-mediated sorting.ESCRT-III complex.associated component VPS46/CHMP1 |