Gene: Cre03.g188500
General Information
Structural Information
- Species Chlamydomonas reinhardtii
- Gene Identifier Cre03.g188500
- Transcript Identifier Cre03.g188500.t1.2
- Gene Type Coding gene
- Location chromosome_3 : 5761888-5763454 : positive
Gene Family Information
- ID HOM05D002592
- #Genes/#Species 263/98
- Phylogenetic origin
- ID ORTHO05D003149
- #Genes/#Species 241/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Cre03.g188500.v5.5
- pacid 30787941
- alias g3904.t1
- geneName VPS46
- uniprot A8IRR6
Descriptions
- Description Expressed Protein. Similar to yeast Did2p/Vps46p, SNF7-domain protein, component of the ESCRT-III complex involved in the ubiquitin-mediated internalization into the multi-vesicular bodies (late endosomes)
- Description Subunit of the ESCRT-III complex
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0007034 | IEA | GOA Database | vacuolar transport | |
| GO:0007034 | IEA | InterPro | vacuolar transport | |
| GO:0045324 | IBA | GOA Database | late endosome to vacuole transport | |
| GO:0015031 | IBA | GOA Database | protein transport | |
| GO:0032509 | IBA | GOA Database | endosome transport via multivesicular body sorting pathway | |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT1G73030 |
| GO:0090351 | ISO | PLAZA Integrative Orthology | seedling development | AT1G73030 |
| GO:0000578 | ISO | PLAZA Integrative Orthology | embryonic axis specification | AT1G73030 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G73030 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005768 | IEA | GOA Database | endosome | |
| GO:0000815 | IBA | GOA Database | ESCRT III complex | |
| GO:0005771 | IBA | GOA Database | multivesicular body |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR005024 | Snf7 family |
| Mapman id | Description |
|---|---|
| 22.4.1.3.5 | Vesicle trafficking.endocytic trafficking.ESCRT-mediated sorting.ESCRT-III complex.associated component VPS46/CHMP1 |