Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p20390 Brassica napus
A02p12420 Brassica napus
A03p16240 Brassica napus
A05p09280 Brassica napus
A05p10020 Brassica napus
A08p12760 Brassica napus
A10p08970 Brassica napus
A10p09000 Brassica napus
A10p09010 Brassica napus
Aa31LG2G13000 Aethionema arabicum
Aa31LG3G7750 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.664 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.707 Anthoceros agrestis
Actinidia13615 Actinidia chinensis
Actinidia31665 Actinidia chinensis
Ah.06g190670 Amaranthus hybridus
Ah.07g207490 Amaranthus hybridus
Ah.07g207500 Amaranthus hybridus
AL1G51940 Arabidopsis lyrata
AL1G52040 Arabidopsis lyrata
AL509U10010 Arabidopsis lyrata
AL7G37790 Arabidopsis lyrata
AL7G37830 Arabidopsis lyrata
AL8G25510 Arabidopsis lyrata
AL8G25660 Arabidopsis lyrata
Aqoxy3G02713 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5K230Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5M2IN1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.78WKC1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D8BFI7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GAPV5X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WEUQ1L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X1JF0V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XWL372 Arachis hypogaea
AT2G35670 Arabidopsis thaliana
AT4G16810 Arabidopsis thaliana
AT4G16845 Arabidopsis thaliana
AT5G51230 Arabidopsis thaliana
ATR0057G104 Amborella trichopoda
Atru.chr1.1554 Acer truncatum
Atru.chr1.1562 Acer truncatum
Atru.chr9.1241 Acer truncatum
AUR62000472 Chenopodium quinoa
AUR62002245 Chenopodium quinoa
AUR62006814 Chenopodium quinoa
AUR62015456 Chenopodium quinoa
BcaB01g06360 Brassica carinata
BcaB01g06361 Brassica carinata
BcaB02g09401 Brassica carinata
BcaB02g09403 Brassica carinata
BcaB04g18395 Brassica carinata
BcaB05g24015 Brassica carinata
BcaB08g35482 Brassica carinata
BcaC01g06092 Brassica carinata
BcaC01g06094 Brassica carinata
BcaC02g11688 Brassica carinata
BcaC02g11770 Brassica carinata
BcaC03g14618 Brassica carinata
BcaC04g20712 Brassica carinata
BcaC04g20713 Brassica carinata
BcaC04g20720 Brassica carinata
BcaC07g38024 Brassica carinata
BcaC09g50420 Brassica carinata
BcaNung00148 Brassica carinata
BolC1t02518H Brassica oleracea
BolC2t08189H Brassica oleracea
BolC3t14300H Brassica oleracea
BolC4t22806H Brassica oleracea
BolC4t22882H Brassica oleracea
BolC4t22884H Brassica oleracea
BolC8t48413H Brassica oleracea
BolC9t56889H Brassica oleracea
BolC9t56895H Brassica oleracea
BolC9t56896H Brassica oleracea
BraA01t01968Z Brassica rapa
BraA02t06306Z Brassica rapa
BraA03t10915Z Brassica rapa
BraA05t19885Z Brassica rapa
BraA05t19943Z Brassica rapa
BraA08t33264Z Brassica rapa
BraA10t42981Z Brassica rapa
BraA10t42983Z Brassica rapa
BraA10t42984Z Brassica rapa
BraA10t42985Z Brassica rapa
BraSC35t46010Z Brassica rapa
C01p25650 Brassica napus
C02p20530 Brassica napus
C03p19120 Brassica napus
C04p11580 Brassica napus
C04p12350 Brassica napus
C04p12380 Brassica napus
C09p39920 Brassica napus
C09p39990 Brassica napus
CAN.G247.10 Capsicum annuum
CAN.G388.41 Capsicum annuum
CANSAT21G2380 Cannabis sativa
CANSAT56G4389 Cannabis sativa
CARHR223480 Cardamine hirsuta
CARHR256780 Cardamine hirsuta
CARHR256790 Cardamine hirsuta
Carub.0004s1740 Capsella rubella
Carub.0007s2448 Capsella rubella
Carub.0007s2453 Capsella rubella
Carub.0007s2454 Capsella rubella
Carub.0008s1127 Capsella rubella
Ca_10414_v3 Cicer arietinum L.
Ca_10415_v3 Cicer arietinum L.
Ca_24601_v3 Cicer arietinum L.
CBR_g36845 Chara braunii
Cc02_g04790 Coffea canephora
CDE05G2554 Ceratophyllum demersum
Ciclev10004955m.g Citrus clementina
Ciclev10006320m.g Citrus clementina
Ciclev10024194m.g Citrus clementina
Ciclev10024349m.g Citrus clementina
CiPaw.07G184300 Carya illinoinensis
CiPaw.08G042100 Carya illinoinensis
CiPaw.12G048300 Carya illinoinensis
ClCG07G017040 Citrullus lanatus
ClCG10G002390 Citrullus lanatus
COL.COLO4_10019 Corchorus olitorius
COL.COLO4_37126 Corchorus olitorius
COL.COLO4_37330 Corchorus olitorius
Cpa.g.sc13.243 Carica papaya
Cpa.g.sc89.29 Carica papaya
Cpa.g.sc89.33 Carica papaya
CsaV3_3G002420 Cucumis sativus L.
CsaV3_4G004260 Cucumis sativus L.
CSS0005470 Camellia sinensis var. sinensis
CSS0017888 Camellia sinensis var. sinensis
CSS0021488 Camellia sinensis var. sinensis
CSS0044740 Camellia sinensis var. sinensis
DCAR_009458 Daucus carota
DCAR_018073 Daucus carota
Dinv12863 Davidia involucrata
Dinv32353 Davidia involucrata
Dinv32354 Davidia involucrata
Duzib068G0701 Durio zibethinus
Duzib068G0769 Durio zibethinus
Duzib084G1318 Durio zibethinus
Duzib205G1173 Durio zibethinus
Duzib205G1697 Durio zibethinus
ECA232G2610 Erigeron canadensis
ECA233G4451 Erigeron canadensis
ECA238G3962 Erigeron canadensis
EL10Ac3g05881 Beta vulgaris
EL10Ac4g09555 Beta vulgaris
Eucgr.A02925 Eucalyptus grandis
Eucgr.E00374 Eucalyptus grandis
FAN04G1691 Fragaria x ananassa
FAN08G0712 Fragaria x ananassa
FAN11G0474 Fragaria x ananassa
FAN13G2007 Fragaria x ananassa
FAN16G0980 Fragaria x ananassa
FAN16G1369 Fragaria x ananassa
FAN18G3698 Fragaria x ananassa
FAN25G2331 Fragaria x ananassa
FvH4_3g17191 Fragaria vesca
FvH4_5g19940 Fragaria vesca
Glyma.01G206000 Glycine max
Glyma.10G118800 Glycine max
Glyma.10G193800 Glycine max
Glyma.11G036800 Glycine max
Glyma.20G069800 Glycine max
Gohir.A03G005800 Gossypium hirsutum
Gohir.A03G060200 Gossypium hirsutum
Gohir.A07G043900 Gossypium hirsutum
Gohir.D03G105800 Gossypium hirsutum
Gohir.D03G166700 Gossypium hirsutum
Gohir.D07G048300 Gossypium hirsutum
Gorai.001G051500 Gossypium raimondii
Gorai.003G112000 Gossypium raimondii
Gorai.003G176300 Gossypium raimondii
GSVIVG01004791001 Vitis vinifera
GSVIVG01005384001 Vitis vinifera
GSVIVG01013898001 Vitis vinifera
HanXRQChr04g0111051 Helianthus annuus
HanXRQChr04g0111961 Helianthus annuus
HanXRQChr08g0222791 Helianthus annuus
HanXRQChr14g0461041 Helianthus annuus
HanXRQChr14g0461141 Helianthus annuus
HanXRQChr14g0461151 Helianthus annuus
Haze_07964 Corylus avellana
Haze_22210 Corylus avellana
Hma1.2p1_0502F.1_g167760 Hydrangea macrophylla
HPP92_008894 Vanilla planifolia
HPP92_008895 Vanilla planifolia
HPP92_008898 Vanilla planifolia
Hund04563 Selenicereus undatus
Hund14507 Selenicereus undatus
Lalb_Chr02g0150791 Lupinus albus
Lalb_Chr03g0036531 Lupinus albus
Lalb_Chr06g0169821 Lupinus albus
Lalb_Chr06g0169831 Lupinus albus
Lalb_Chr09g0324251 Lupinus albus
Lalb_Chr09g0329881 Lupinus albus
Lj1C975G2 Lonicera japonica
Lj2g0003297 Lotus japonicus
Lj5g0022168 Lotus japonicus
Lj8A48G37 Lonicera japonica
Lsat_1_v5_gn_2_127041 Lactuca sativa
Lsat_1_v5_gn_8_9821 Lactuca sativa
Manes.01G086000 Manihot esculenta
Manes.06G130800 Manihot esculenta
Manes.14G039200 Manihot esculenta
Mapoly0092s0032 Marchantia polymorpha
MBI04_g41165_MAGBIO Magnolia biondii
MBI04_g41767_MAGBIO Magnolia biondii
MBI14_g12134_MAGBIO Magnolia biondii
MBI15_g29838_MAGBIO Magnolia biondii
MCO12G120 Micromonas commoda
MD03G1252500 Malus domestica
MD04G1057300 Malus domestica
MD06G1050700 Malus domestica
MD11G1274400 Malus domestica
MD11G1274700 Malus domestica
Medtr1g090230 Medicago truncatula
Medtr1g090240 Medicago truncatula
Medtr5g013150 Medicago truncatula
MELO3C013911.2 Cucumis melo
MELO3C017639.2 Cucumis melo
Migut.F01204 Erythranthe guttata
MSTRG.8403 Avicennia marina
Nitab4.5_0000600g0150 Nicotiana tabacum
Nitab4.5_0001472g0030 Nicotiana tabacum
Nitab4.5_0002153g0020 Nicotiana tabacum
Nitab4.5_0002153g0040 Nicotiana tabacum
Nitab4.5_0007599g0010 Nicotiana tabacum
Nn1g00846 Nelumbo nucifera
Nn6g33823 Nelumbo nucifera
Nn6g33824 Nelumbo nucifera
Nn7g35910 Nelumbo nucifera
Oeu037940.1 Olea europaea
Oeu044193.4 Olea europaea
Oeu045399.1 Olea europaea
Os04g0162100 Oryza sativa ssp. japonica
Os09g0306800 Oryza sativa ssp. japonica
Peaxi162Scf01305g00028 Petunia axillaris
PGR042G0154 Punica granatum
PGR042G2377 Punica granatum
Phvul.002G000500 Phaseolus vulgaris
Phvul.007G137900 Phaseolus vulgaris
Phvul.007G138000 Phaseolus vulgaris
Phvul.007G241400 Phaseolus vulgaris
Phvul.007G241500 Phaseolus vulgaris
Potri.001G080200 Populus trichocarpa
Potri.003G081400 Populus trichocarpa
Potri.003G150450 Populus trichocarpa
Pp3c25_12300 Physcomitrium patens
Pp3c5_24460 Physcomitrium patens
Pp3c6_4460 Physcomitrium patens
Prupe.4G152500 Prunus persica
Prupe.5G060700 Prunus persica
Psat0ss6263g0320 Pisum sativum
Psat6g171080 Pisum sativum
Psat6g171240 Pisum sativum
Psat6g171280 Pisum sativum
Psat7g010240 Pisum sativum
Psat7g089680 Pisum sativum
PSO063G6812 Papaver somniferum
PSO170G4693 Papaver somniferum
QL09p027767 Quercus lobata
QL12p009231 Quercus lobata
RcHm_v2.0_Chr5g0028591 Rosa chinensis
RcHm_v2.0_Chr7g0204761 Rosa chinensis
Rhsim03G0160600 Rhododendron simsii
Sabra01G0057500 Salix brachista
Sabra03G0052400 Salix brachista
Sabra03G0109000 Salix brachista
SalBow6G1922 Salvia bowleyana
Sc07g0009130 Simmondsia chinensis
Sc07g0009140 Simmondsia chinensis
Sc22g0001070 Simmondsia chinensis
Sed0004355 Sechium edule
Sed0010479 Sechium edule
Sed0011949 Sechium edule
SEGI_16877 Sequoiadendron giganteum
SGA_v2.0_scaffold136G34993 Striga asiatica
SHI14108 Sapria himalayana
SMO111G0164 Selaginella moellendorffii
Solyc03g093640.4 Solanum lycopersicum
Sopen03g024510 Solanum pennellii
Sp4g17930 Schrenkiella parvula
Sp6g13430 Schrenkiella parvula
Sp7g17270 Schrenkiella parvula
TAR375G1034 Trochodendron aralioides
TAR629G1422 Trochodendron aralioides
TAR636G2730 Trochodendron aralioides
THA.LOC104807917 Tarenaya hassleriana
THA.LOC104811537 Tarenaya hassleriana
Thecc.03G147700 Theobroma cacao
Thecc.03G244300 Theobroma cacao
Thhalv10012944m.g Eutrema salsugineum
Thhalv10017609m.g Eutrema salsugineum
Thhalv10025216m.g Eutrema salsugineum
Thhalv10027237m.g Eutrema salsugineum
TPR.G13382 Trifolium pratense
TPR.G13383 Trifolium pratense
TPR.G17973 Trifolium pratense
TPR.G20904 Trifolium pratense
TWI23G0847 Tripterygium wilfordii
TWI60G0929 Tripterygium wilfordii
unitig_578.g16614 Utricularia gibba
vmacro06839 Vaccinium macrocarpon
VMungo0720G2252 Vigna mungo
VMungo0720G2727 Vigna mungo
VMungo0720G2992 Vigna mungo
VMungo1215G0554 Vigna mungo
Zm00001eb057460 Zea mays
Zm00001eb309520 Zea mays

User provided reference genes

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