Gene: Os04g0162100
General Information
Structural Information
- Species Oryza sativa ssp. japonica
- Gene Identifier Os04g0162100
- Transcript Identifier Os04t0162100-01
- Gene Type Coding gene
- Location chr04 : 4278177-4290288 : positive
Gene Family Information
- ID HOM05D002164
- #Genes/#Species 310/96
- Phylogenetic origin
- ID ORTHO05D002267
- #Genes/#Species 302/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Os04t0162100-01
- MSU-ID LOC_Os04g08034.1
- MSU-ID LOC_Os04g08034.2
- MSU-ID LOC_Os04g08034.3
- MSU-ID LOC_Os04g08034.4
- MSU-ID LOC_Os04g08034.5
- MSU-ID LOC_Os04g08034.6
- symbol OsEMF2a
- symbol OsEMF2
- name EMBRYONGIC FLOWER 2
- name EMBRYONGIC FLOWER 2a
- uniprot Q0JF48
Descriptions
- Description Polycomb group protein, Supressor of Zeste(12) homolog, C2H2-type zinc finger motif containing protein
- Description Similar to EMF protein.
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006325 | IEA | GOA Database | chromatin organization | |
| GO:0030154 | IEA | GOA Database | cell differentiation | |
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT4G16845 |
| GO:0006349 | ISO | PLAZA Integrative Orthology | regulation of gene expression by genetic imprinting | AT5G51230 |
| GO:0006306 | ISO | PLAZA Integrative Orthology | DNA methylation | AT2G35670 |
| GO:2000014 | ISO | PLAZA Integrative Orthology | regulation of endosperm development | AT2G35670 |
| GO:0009910 | ISO | PLAZA Integrative Orthology | negative regulation of flower development | AT5G51230 |
| GO:0010048 | ISO | PLAZA Integrative Orthology | vernalization response | AT4G16845 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0031490 | IBA | GOA Database | chromatin DNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G51230 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT5G51230 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IBA | GOA Database | nucleus | |
| GO:0005677 | ISO | PLAZA Integrative Orthology | chromatin silencing complex | AT4G16845 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR019135 | Polycomb protein, VEFS-Box |
| Mapman id | Description |
|---|---|
| 12.3.3.2.1.1.3 | Chromatin organisation.post-translational histone modification.histone lysine methylation.class-I histone methyltransferase activities.PRC2 histone methylation complex.VRN/FIS/EMF core subcomplexes.component EMF2/VRN2/FIS2 |