Gene: Sp6g13430
General Information
Structural Information
- Species Schrenkiella parvula
- Gene Identifier Sp6g13430
- Transcript Identifier Sp6g13430.1
- Gene Type Coding gene
- Location ch6-6 : 392505-397581 : positive
Gene Family Information
- ID HOM05D002164
- #Genes/#Species 310/96
- Phylogenetic origin
- ID ORTHO05D002267
- #Genes/#Species 302/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Sp6g13430.v2.2
- pacid 45080857
Descriptions
- Description PTHR22597:SF0 - POLYCOMB PROTEIN SUZ12
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006349 | ISO | PLAZA Integrative Orthology | regulation of gene expression by genetic imprinting | AT5G51230 |
| GO:0009908 | ISO | PLAZA Integrative Orthology | flower development | Os09g0306800 |
| GO:0048586 | ISO | PLAZA Integrative Orthology | regulation of long-day photoperiodism, flowering | Os09g0306800 |
| GO:0006342 | ISO | PLAZA Integrative Orthology | chromatin silencing | Os09g0306800 |
| GO:0009910 | ISO | PLAZA Integrative Orthology | negative regulation of flower development | AT5G51230 |
| GO:0070734 | ISO | PLAZA Integrative Orthology | histone H3-K27 methylation | Os09g0306800 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G51230 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT5G51230 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G51230 |
| GO:0031519 | ISO | PLAZA Integrative Orthology | PcG protein complex | Os09g0306800 |
| GO:0005677 | ISO | PLAZA Integrative Orthology | chromatin silencing complex | Os09g0306800 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR019135 | Polycomb protein, VEFS-Box |
| Mapman id | Description |
|---|---|
| 12.3.3.2.1.1.3 | Chromatin organisation.post-translational histone modification.histone lysine methylation.class-I histone methyltransferase activities.PRC2 histone methylation complex.VRN/FIS/EMF core subcomplexes.component EMF2/VRN2/FIS2 |