Gene: AT4G16810
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G16810
- Transcript Identifier AT4G16810.1
- Gene Type Coding gene
- Location Chr4 : 9460072-9462253 : negative
Gene Family Information
- ID HOM05D002164
- #Genes/#Species 310/96
- Phylogenetic origin
- ID ORTHO05D002267
- #Genes/#Species 302/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT4G16810.1
- uniprot B3H7I2
Descriptions
- Description VEFS-Box of polycomb protein
- Computational description VEFS-Box of polycomb protein; CONTAINS InterPro DOMAIN/s: Polycomb protein, VEFS-Box (InterPro:IPR019135); BEST Arabidopsis thaliana protein match is: VEFS-Box of polycomb protein (TAIR:AT4G16845.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009908 | ISO | PLAZA Integrative Orthology | flower development | Os09g0306800 |
| GO:0048586 | ISO | PLAZA Integrative Orthology | regulation of long-day photoperiodism, flowering | Os09g0306800 |
| GO:0006342 | ISO | PLAZA Integrative Orthology | chromatin silencing | Os09g0306800 |
| GO:0070734 | ISO | PLAZA Integrative Orthology | histone H3-K27 methylation | Os09g0306800 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031490 | IBA | Gene Ontology | chromatin DNA binding | 1 |
| GO:0046872 | IEA | GOA Database | metal ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISM, IBA | Gene Ontology | nucleus | 1 |
| GO:0031519 | ISO | PLAZA Integrative Orthology | PcG protein complex | Os09g0306800 |
| GO:0005677 | ISO | PLAZA Integrative Orthology | chromatin silencing complex | Os09g0306800 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR019135 | Polycomb protein, VEFS-Box |
| Mapman id | Description |
|---|---|
| 12.3.3.2.1.1.3 | Chromatin organisation.post-translational histone modification.histone lysine methylation.class-I histone methyltransferase activities.PRC2 histone methylation complex.VRN/FIS/EMF core subcomplexes.component EMF2/VRN2/FIS2 |