Gene: Sopen03g024510
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen03g024510
- Transcript Identifier Sopen03g024510.3
- Gene Type Coding gene
- Location Spenn-ch03 : 57221369-57248862 : negative
Gene Family Information
- ID HOM05D002164
- #Genes/#Species 310/96
- Phylogenetic origin
- ID ORTHO05D002267
- #Genes/#Species 302/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen03g024510.3
Descriptions
- Description Polycomb group protein with zinc finger domain involved in negative regulation of reproductive development. Forms a complex with FIE, CLF, and MSI1. This complex modulates the expression of target genes including AG, PI and AP3. | EMBRYONIC FLOWER 2 (EMF2) | CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like , Polycomb protein, VEFS-Box | BEST Arabidopsis thaliana protein match is: VEFS-Box of polycomb protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006342 | ISO | PLAZA Integrative Orthology | chromatin silencing | Os09g0306800 |
| GO:0009910 | ISO | PLAZA Integrative Orthology | negative regulation of flower development | AT5G51230 |
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT4G16845 |
| GO:0006349 | ISO | PLAZA Integrative Orthology | regulation of gene expression by genetic imprinting | AT5G51230 |
| GO:0006306 | ISO | PLAZA Integrative Orthology | DNA methylation | AT2G35670 |
| GO:0009908 | ISO | PLAZA Integrative Orthology | flower development | Os09g0306800 |
| GO:0048586 | ISO | PLAZA Integrative Orthology | regulation of long-day photoperiodism, flowering | Os09g0306800 |
| GO:2000014 | ISO | PLAZA Integrative Orthology | regulation of endosperm development | AT2G35670 |
| GO:0010048 | ISO | PLAZA Integrative Orthology | vernalization response | AT4G16845 |
| GO:0070734 | ISO | PLAZA Integrative Orthology | histone H3-K27 methylation | Os09g0306800 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT5G51230 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G51230 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005677 | ISO | PLAZA Integrative Orthology | chromatin silencing complex | AT4G16845 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G51230 |
| GO:0031519 | ISO | PLAZA Integrative Orthology | PcG protein complex | Os09g0306800 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR019135 | Polycomb protein, VEFS-Box |
| Mapman id | Description |
|---|---|
| 12.3.3.2.1.1.3 | Chromatin organisation.post-translational histone modification.histone lysine methylation.class-I histone methyltransferase activities.PRC2 histone methylation complex.VRN/FIS/EMF core subcomplexes.component EMF2/VRN2/FIS2 |