Gene: AT5G51230
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G51230
- Transcript Identifier AT5G51230.1
- Gene Type Coding gene
- Location Chr5 : 20824153-20829344 : positive
Gene Family Information
- ID HOM05D002164
- #Genes/#Species 310/96
- Phylogenetic origin
- ID ORTHO05D002267
- #Genes/#Species 302/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT5G51230.1
- symbol EMF2
- Alias AtEMF2,CYR1,VEF2,CYTOKININ RESISTANT 1
- full_name EMBRYONIC FLOWER 2
- uniprot Q8L6Y4
Descriptions
- Description VEFS-Box of polycomb protein
- Computational description EMBRYONIC FLOWER 2 (EMF2); CONTAINS InterPro DOMAIN/s: Polycomb protein, VEFS-Box (InterPro:IPR019135); BEST Arabidopsis thaliana protein match is: VEFS-Box of polycomb protein (TAIR:AT4G16845.1); Has 297 Blast hits to 235 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 134; Fungi - 2; Plants - 148; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0070734 | ISO | PLAZA Integrative Orthology | histone H3-K27 methylation | Os09g0306800 |
| GO:0006342 | ISO | PLAZA Integrative Orthology | chromatin silencing | Os09g0306800 |
| GO:0048586 | ISO | PLAZA Integrative Orthology | regulation of long-day photoperiodism, flowering | Os09g0306800 |
| GO:0030154 | IEA | GOA Database | cell differentiation | |
| GO:0009908 | IEA | GOA Database | flower development | |
| GO:0006325 | IEA | GOA Database | chromatin organization | |
| GO:0009910 | IMP | Gene Ontology | negative regulation of flower development | 1 |
| GO:0006349 | IMP | Gene Ontology | regulation of gene expression by genetic imprinting | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0031490 | IBA | Gene Ontology | chromatin DNA binding | 3 |
| GO:0000976 | IPI | Gene Ontology | transcription cis-regulatory region binding | 4 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 5 |
| GO:0003677 | ISS | Gene Ontology | DNA binding | 6 |
| GO:0003700 | ISS | Gene Ontology | DNA-binding transcription factor activity | 7 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005677 | ISO | PLAZA Integrative Orthology | chromatin silencing complex | Os09g0306800 |
| GO:0031519 | ISO | PLAZA Integrative Orthology | PcG protein complex | Os09g0306800 |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IDA ISS, ISM, IBA | Gene Ontology | nucleus | 3 6 8 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR019135 | Polycomb protein, VEFS-Box |
| Mapman id | Description |
|---|---|
| 12.3.3.2.1.1.3 | Chromatin organisation.post-translational histone modification.histone lysine methylation.class-I histone methyltransferase activities.PRC2 histone methylation complex.VRN/FIS/EMF core subcomplexes.component EMF2/VRN2/FIS2 |