Gene: AT2G35670
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G35670
- Transcript Identifier AT2G35670.1
- Gene Type Coding gene
- Location Chr2 : 14992721-14996558 : positive
Gene Family Information
- ID HOM05D002164
- #Genes/#Species 310/96
- Phylogenetic origin
- ID ORTHO05D002267
- #Genes/#Species 302/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT2G35670.1
- symbol FIS2
- Alias FIE2,FERTILIZATION-INDEPENDENT ENDOSPERM 2
- full_name FERTILIZATION INDEPENDENT SEED 2
- uniprot P0DKJ8
Descriptions
- Description VEFS-Box of polycomb protein
- Computational description FERTILIZATION INDEPENDENT SEED 2 (FIS2); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Polycomb protein, VEFS-Box (InterPro:IPR019135); BEST Arabidopsis thaliana protein match is: VEFS-Box of polycomb protein (TAIR:AT4G16845.2); Has 12278 Blast hits to 7688 proteins in 680 species: Archae - 7; Bacteria - 1319; Metazoa - 4326; Fungi - 1979; Plants - 496; Viruses - 125; Other Eukaryotes - 4026 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0070734 | ISO | PLAZA Integrative Orthology | histone H3-K27 methylation | Os09g0306800 |
| GO:0006342 | ISO | PLAZA Integrative Orthology | chromatin silencing | Os09g0306800 |
| GO:0048586 | ISO | PLAZA Integrative Orthology | regulation of long-day photoperiodism, flowering | Os09g0306800 |
| GO:0009908 | ISO | PLAZA Integrative Orthology | flower development | Os09g0306800 |
| GO:0006355 | ISS | Gene Ontology | regulation of transcription, DNA-templated | 1 |
| GO:0006349 | IEP | Gene Ontology | regulation of gene expression by genetic imprinting | 2 |
| GO:0006306 | IEP | Gene Ontology | DNA methylation | 2 |
| GO:2000014 | IMP | Gene Ontology | regulation of endosperm development | 3 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0031490 | IBA | Gene Ontology | chromatin DNA binding | 4 |
| GO:0003700 | ISS | Gene Ontology | DNA-binding transcription factor activity | 5 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IDA ISM, IBA | Gene Ontology | nucleus | 3 4 |
| GO:0005677 | ISO | PLAZA Integrative Orthology | chromatin silencing complex | Os09g0306800 |
| GO:0031519 | ISO | PLAZA Integrative Orthology | PcG protein complex | Os09g0306800 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR019135 | Polycomb protein, VEFS-Box |
| Mapman id | Description |
|---|---|
| 12.3.3.2.1.1.3 | Chromatin organisation.post-translational histone modification.histone lysine methylation.class-I histone methyltransferase activities.PRC2 histone methylation complex.VRN/FIS/EMF core subcomplexes.component EMF2/VRN2/FIS2 |