Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p39550 Brassica napus
A02p17980 Brassica napus
A05p35330 Brassica napus
A07p38580 Brassica napus
Aa31LG4G2730 Aethionema arabicum
Aa31LG8G1350 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4287 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2383 Anthoceros agrestis
Actinidia08004 Actinidia chinensis
Actinidia14933 Actinidia chinensis
Actinidia16695 Actinidia chinensis
Actinidia32206 Actinidia chinensis
Actinidia32207 Actinidia chinensis
Actinidia32208 Actinidia chinensis
Ah.15g095140 Amaranthus hybridus
AL2G32060 Arabidopsis lyrata
AL3G26350 Arabidopsis lyrata
Aqoxy7G04006 Aquilegia oxysepala
Aqoxy7G04079 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1RN2YG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M8Z2DU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NEIN3W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RMM65D Arachis hypogaea
AT1G72390 Arabidopsis thaliana
AT3G14120 Arabidopsis thaliana
ATR0681G273 Amborella trichopoda
ATR0681G401 Amborella trichopoda
Atru.chr1.4088 Acer truncatum
Atru.chr11.322 Acer truncatum
Atru.chr11.323 Acer truncatum
Atru.chr11.324 Acer truncatum
Atru.chr12.2376 Acer truncatum
Atru.chr12.2396 Acer truncatum
Atru.chr2.1505 Acer truncatum
AUR62001442 Chenopodium quinoa
AUR62001443 Chenopodium quinoa
AUR62009922 Chenopodium quinoa
AUR62009923 Chenopodium quinoa
BcaB03g14986 Brassica carinata
BcaB03g14988 Brassica carinata
BcaB05g24751 Brassica carinata
BcaC03g15372 Brassica carinata
BcaC03g15374 Brassica carinata
BcaC05g29121 Brassica carinata
BcaNung06672 Brassica carinata
BolC1t05000H Brassica oleracea
BolC2t09038H Brassica oleracea
BolC2t10453H Brassica oleracea
BolC5t34029H Brassica oleracea
BolC6t39719H Brassica oleracea
BraA01t03995Z Brassica rapa
BraA02t06845Z Brassica rapa
BraA05t22343Z Brassica rapa
BraA07t31416Z Brassica rapa
C01p30760 Brassica napus
C01p50480 Brassica napus
C02p29880 Brassica napus
C02p44100 Brassica napus
C05p53520 Brassica napus
C06p46750 Brassica napus
CAN.G1243.8 Capsicum annuum
CAN.G1243.9 Capsicum annuum
CAN.G1743.7 Capsicum annuum
CANSAT01G2891 Cannabis sativa
CANSAT56G0878 Cannabis sativa
CANSAT56G4149 Cannabis sativa
CARHR065290 Cardamine hirsuta
CARHR088980 Cardamine hirsuta
Carub.0002s1924 Capsella rubella
Carub.0003s1373 Capsella rubella
Ca_13542_v3 Cicer arietinum L.
Ca_23411_v3 Cicer arietinum L.
Ca_23412_v3 Cicer arietinum L.
Ca_23413_v3 Cicer arietinum L.
CBR_g31688 Chara braunii
CBR_g39720 Chara braunii
Cc04_g01030 Coffea canephora
Cc04_g01040 Coffea canephora
Cc04_g01050 Coffea canephora
CDE06G0404 Ceratophyllum demersum
CDE06G0789 Ceratophyllum demersum
CDE07G1134 Ceratophyllum demersum
CDE07G1198 Ceratophyllum demersum
CDE07G1706 Ceratophyllum demersum
Cfa003503 Carpinus fangiana
Cfa003510 Carpinus fangiana
Cfa015821 Carpinus fangiana
Ciclev10024725m.g Citrus clementina
Ciclev10027090m.g Citrus clementina
CiPaw.01G215800 Carya illinoinensis
CiPaw.01G216000 Carya illinoinensis
CiPaw.02G133700 Carya illinoinensis
CiPaw.05G244500 Carya illinoinensis
ClCG09G001140 Citrullus lanatus
ClCG09G001150 Citrullus lanatus
COL.COLO4_30797 Corchorus olitorius
COL.COLO4_30798 Corchorus olitorius
Cpa.g.sc169.27 Carica papaya
Cpa.g.sc169.28 Carica papaya
Cpa.g.sc169.29 Carica papaya
Cpa.g.sc169.30 Carica papaya
Cpa.g.sc169.31 Carica papaya
Cpa.g.sc169.33 Carica papaya
Cpa.g.sc25.150 Carica papaya
Cre10.g425675 Chlamydomonas reinhardtii
CsaV3_7G034240 Cucumis sativus L.
CsaV3_7G034250 Cucumis sativus L.
CSS0002239 Camellia sinensis var. sinensis
CSS0003623 Camellia sinensis var. sinensis
CSS0004697 Camellia sinensis var. sinensis
CSS0013236 Camellia sinensis var. sinensis
CSS0014980 Camellia sinensis var. sinensis
CSS0017686 Camellia sinensis var. sinensis
CSS0019722 Camellia sinensis var. sinensis
CSS0020573 Camellia sinensis var. sinensis
CSS0020628 Camellia sinensis var. sinensis
CSS0033574 Camellia sinensis var. sinensis
CSS0033867 Camellia sinensis var. sinensis
CSS0036362 Camellia sinensis var. sinensis
CSS0036461 Camellia sinensis var. sinensis
CSS0036669 Camellia sinensis var. sinensis
CSS0036951 Camellia sinensis var. sinensis
CSS0047517 Camellia sinensis var. sinensis
CSS0050059 Camellia sinensis var. sinensis
DCAR_026423 Daucus carota
DCAR_026425 Daucus carota
Dinv04913 Davidia involucrata
Dinv16157 Davidia involucrata
Dinv20408 Davidia involucrata
Dinv37845 Davidia involucrata
Dinv37967 Davidia involucrata
Duzib192G0006 Durio zibethinus
Duzib192G0748 Durio zibethinus
Duzib235G0009 Durio zibethinus
Duzib235G0671 Durio zibethinus
Duzib235G1365 Durio zibethinus
ECA232G2821 Erigeron canadensis
ECA234G1749 Erigeron canadensis
ECA247G2654 Erigeron canadensis
EL10Ac7g16444 Beta vulgaris
EL10Ac7g16445 Beta vulgaris
Eucgr.K02038 Eucalyptus grandis
FAN02G0489 Fragaria x ananassa
FAN02G1816 Fragaria x ananassa
FAN05G2069 Fragaria x ananassa
FAN05G2930 Fragaria x ananassa
FAN05G4033 Fragaria x ananassa
FAN09G3103 Fragaria x ananassa
FAN09G4066 Fragaria x ananassa
FAN14G1459 Fragaria x ananassa
FAN14G5889 Fragaria x ananassa
FvH4_6g35170 Fragaria vesca
FvH4_6g35180 Fragaria vesca
Glyma.07G042000 Glycine max
Glyma.07G042100 Glycine max
Glyma.16G010300 Glycine max
Glyma.16G010400 Glycine max
Glyma.16G010466 Glycine max
Gohir.A05G138700 Gossypium hirsutum
Gohir.A06G143000 Gossypium hirsutum
Gohir.A09G079900 Gossypium hirsutum
Gohir.D05G140900 Gossypium hirsutum
Gohir.D06G149500 Gossypium hirsutum
Gohir.D09G079550 Gossypium hirsutum
Gorai.006G094800 Gossypium raimondii
Gorai.009G145100 Gossypium raimondii
Gorai.010G174200 Gossypium raimondii
GSVIVG01016716001 Vitis vinifera
GSVIVG01016717001 Vitis vinifera
GSVIVG01016718001 Vitis vinifera
HanXRQChr04g0094421 Helianthus annuus
HanXRQChr09g0277131 Helianthus annuus
HanXRQChr10g0311861 Helianthus annuus
HanXRQChr11g0341991 Helianthus annuus
HanXRQChr12g0360181 Helianthus annuus
Haze_00674 Corylus avellana
Haze_16065 Corylus avellana
Haze_16071 Corylus avellana
Haze_16076 Corylus avellana
Hma1.2p1_0225F.1_g094790 Hydrangea macrophylla
Hma1.2p1_0229F.1_g096760 Hydrangea macrophylla
Hma1.2p1_0229F.1_g096770 Hydrangea macrophylla
Hma1.2p1_0229F.1_g096780 Hydrangea macrophylla
Hma1.2p1_0436F.1_g152830 Hydrangea macrophylla
HPP92_011068 Vanilla planifolia
HPP92_021920 Vanilla planifolia
HPP92_022009 Vanilla planifolia
Hund18671 Selenicereus undatus
Hund18672 Selenicereus undatus
Hund18673 Selenicereus undatus
Lalb_Chr04g0253751 Lupinus albus
Lalb_Chr10g0101311 Lupinus albus
Lalb_Chr10g0101321 Lupinus albus
Lalb_Chr10g0101331 Lupinus albus
Lalb_Chr17g0343441 Lupinus albus
Lj3g0004011 Lotus japonicus
Lj3g0013610 Lotus japonicus
Lj6A751T55 Lonicera japonica
Lj6P751T18 Lonicera japonica
Lj6P751T20 Lonicera japonica
Lj9C535G6 Lonicera japonica
Lj9C535T9 Lonicera japonica
Lsat_1_v5_gn_1_37801 Lactuca sativa
Lsat_1_v5_gn_3_42421 Lactuca sativa
Lsat_1_v5_gn_4_91381 Lactuca sativa
Lsat_1_v5_gn_7_52500 Lactuca sativa
Lsat_1_v5_gn_8_46020 Lactuca sativa
Manes.04G148200 Manihot esculenta
Manes.06G063600 Manihot esculenta
Manes.11G016300 Manihot esculenta
Manes.11G016400 Manihot esculenta
Manes.14G108850 Manihot esculenta
Mapoly0024s0112 Marchantia polymorpha
Mapoly0055s0059 Marchantia polymorpha
MBI03_g16538_MAGBIO Magnolia biondii
MBI04_g26258_MAGBIO Magnolia biondii
MBI13_g01700_MAGBIO Magnolia biondii
MBI13_g27860_MAGBIO Magnolia biondii
MBI15_g17575_MAGBIO Magnolia biondii
MBI16_g25623_MAGBIO Magnolia biondii
MBI19_g29883_MAGBIO Magnolia biondii
MBI19_g29884_MAGBIO Magnolia biondii
MCO04G165 Micromonas commoda
MCO11G122 Micromonas commoda
MD09G1178000 Malus domestica
MD09G1178100 Malus domestica
MD16G1035300 Malus domestica
MD17G1148600 Malus domestica
MD17G1148700 Malus domestica
Medtr5g009590 Medicago truncatula
Medtr8g021980 Medicago truncatula
Medtr8g022010 Medicago truncatula
Medtr8g106415 Medicago truncatula
Medtr8g106435 Medicago truncatula
MELO3C024333.2 Cucumis melo
MELO3C024334.2 Cucumis melo
Migut.D00924 Erythranthe guttata
Migut.I01106 Erythranthe guttata
MSTRG.22534 Avicennia marina
Nitab4.5_0000189g0010 Nicotiana tabacum
Nitab4.5_0002716g0060 Nicotiana tabacum
Nitab4.5_0003137g0070 Nicotiana tabacum
Nitab4.5_0004322g0010 Nicotiana tabacum
Nitab4.5_0004322g0020 Nicotiana tabacum
Nitab4.5_0004322g0030 Nicotiana tabacum
Nitab4.5_0006425g0080 Nicotiana tabacum
Nitab4.5_0012739g0010 Nicotiana tabacum
Nn3g17987 Nelumbo nucifera
Nn8g38564 Nelumbo nucifera
Nn8g38642 Nelumbo nucifera
Oeu000390.1 Olea europaea
Oeu008524.4 Olea europaea
Oeu011098.1 Olea europaea
Oeu011104.1 Olea europaea
Oeu013447.1 Olea europaea
Os10g0391100 Oryza sativa ssp. japonica
Os11g0643700 Oryza sativa ssp. japonica
Peaxi162Scf00177g00518 Petunia axillaris
Peaxi162Scf00207g01546 Petunia axillaris
PGR102G3102 Punica granatum
PGR119G1999 Punica granatum
PGSC0003DMG401004368 Solanum tuberosum
PGSC0003DMG402004368 Solanum tuberosum
Phvul.010G125600 Phaseolus vulgaris
Phvul.010G127100 Phaseolus vulgaris
Potri.001G165800 Populus trichocarpa
Potri.001G165900 Populus trichocarpa
Potri.003G069200 Populus trichocarpa
Pp3c13_8340 Physcomitrium patens
Pp3c3_3510 Physcomitrium patens
Pp3c8_15880 Physcomitrium patens
PRCOL_00005073 Prasinoderma coloniale
Prupe.1G319400 Prunus persica
Prupe.3G037300 Prunus persica
Prupe.3G037400 Prunus persica
Psat4g166800 Pisum sativum
Psat4g166880 Pisum sativum
Psat5g189840 Pisum sativum
PSO063G5035 Papaver somniferum
PSO386G0057 Papaver somniferum
PSO386G0179 Papaver somniferum
PSO386G0247 Papaver somniferum
PSO724G0042 Papaver somniferum
PSO724G0283 Papaver somniferum
PSO724G1390 Papaver somniferum
QL01p003145 Quercus lobata
QL05p003384 Quercus lobata
QL05p003642 Quercus lobata
QL05p003662 Quercus lobata
QL11p014752 Quercus lobata
RcHm_v2.0_Chr2g0146431 Rosa chinensis
RcHm_v2.0_Chr2g0146441 Rosa chinensis
Rhsim08G0241300 Rhododendron simsii
Rhsim09G0102300 Rhododendron simsii
Sabra01G0127400 Salix brachista
Sabra01G0127500 Salix brachista
Sabra03G0040600 Salix brachista
SalBow6G5403 Salvia bowleyana
SalBow6G6581 Salvia bowleyana
SalBow7G1889 Salvia bowleyana
Sc15g0000590 Simmondsia chinensis
Sed0014139 Sechium edule
Sed0016273 Sechium edule
SEGI_02030 Sequoiadendron giganteum
SEGI_04298 Sequoiadendron giganteum
SEGI_09459 Sequoiadendron giganteum
SEGI_11558 Sequoiadendron giganteum
SEGI_18725 Sequoiadendron giganteum
SEGI_21815 Sequoiadendron giganteum
SEGI_26020 Sequoiadendron giganteum
SEGI_30532 Sequoiadendron giganteum
SEGI_32525 Sequoiadendron giganteum
SGA_v2.0_scaffold4G02078 Striga asiatica
SGA_v2.0_scaffold71G23886 Striga asiatica
SHI25232 Sapria himalayana
SHI29645 Sapria himalayana
SHI29648 Sapria himalayana
SHI29649 Sapria himalayana
SHI29650 Sapria himalayana
SHI29651 Sapria himalayana
SMO304G0023 Selaginella moellendorffii
Solyc06g063010.4 Solanum lycopersicum
Solyc12g049410.3 Solanum lycopersicum
Sopen06g022460 Solanum pennellii
Sopen12g023890 Solanum pennellii
Sp3g12380 Schrenkiella parvula
Sp5g27470 Schrenkiella parvula
TAR622G0522 Trochodendron aralioides
TAR626G0481 Trochodendron aralioides
TAR626G0833 Trochodendron aralioides
TAR626G0936 Trochodendron aralioides
TAR730G0002 Trochodendron aralioides
THA.LOC104812264 Tarenaya hassleriana
THA.LOC104822664 Tarenaya hassleriana
Thecc.06G124800 Theobroma cacao
Thecc.06G125000 Theobroma cacao
Thhalv10018006m.g Eutrema salsugineum
Thhalv10019957m.g Eutrema salsugineum
TPR.G29992 Trifolium pratense
TPR.G29998 Trifolium pratense
TWI14G1157 Tripterygium wilfordii
TWI59G0043 Tripterygium wilfordii
TWI59G1440 Tripterygium wilfordii
unitig_578.g16691 Utricularia gibba
unitig_747.g21722 Utricularia gibba
vmacro10613 Vaccinium macrocarpon
vmacro10614 Vaccinium macrocarpon
vmacro15054 Vaccinium macrocarpon
vmacro15055 Vaccinium macrocarpon
VMungo0331G0811 Vigna mungo
VMungo0331G1611 Vigna mungo
Zm00001eb165950 Zea mays
Zm00001eb203360 Zea mays
Zm00001eb307710 Zea mays

User provided reference genes

Program Settings