Gene: Carub.0003s1373
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0003s1373
- Transcript Identifier Carub.0003s1373.1
- Gene Type Coding gene
- Location scaffold_3 : 4792153-4800097 : positive
Gene Family Information
- ID HOM05D001849
- #Genes/#Species 354/100
- Phylogenetic origin
- ID ORTHO05D004689
- #Genes/#Species 173/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0003s1373.v1.1
- pacid 39241872
- synonym Carubv10016280m.g
Descriptions
- Description K14301 - nuclear pore complex protein Nup107 (NUP107, NUP84)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0017056 | IEA | InterPro | structural constituent of nuclear pore | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G14120 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005643 | IEA | InterPro | nuclear pore | |
| GO:0005635 | ISO | PLAZA Integrative Orthology | nuclear envelope | AT3G14120 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR007252 | Nuclear pore protein 84/107 |
| Mapman id | Description |
|---|---|
| 23.5.1.1.1.2 | Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.scaffold nucleoporin (NUP107) |