Gene: AT3G14120
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G14120
- Transcript Identifier AT3G14120.2
- Gene Type Coding gene
- Location Chr3 : 4677993-4685455 : positive
Gene Family Information
- ID HOM05D001849
- #Genes/#Species 354/100
- Phylogenetic origin
- ID ORTHO05D004689
- #Genes/#Species 173/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G14120.2
- uniprot Q8L748
Descriptions
- Description nuclear pore complex protein
- Computational description FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport; LOCATED IN: nuclear pore; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear pore protein 84/107 (InterPro:IPR007252); Has 5399 Blast hits to 5001 proteins in 612 species: Archae - 19; Bacteria - 730; Metazoa - 2186; Fungi - 823; Plants - 382; Viruses - 37; Other Eukaryotes - 1222 (source: NCBI BLink).
- Computational description FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport; LOCATED IN: nuclear pore; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear pore protein 84/107 (InterPro:IPR007252); Has 271 Blast hits to 268 proteins in 107 species: Archae - 0; Bacteria - 0; Metazoa - 138; Fungi - 69; Plants - 52; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006406 | IBA | Gene Ontology | mRNA export from nucleus | 1 |
| GO:0015031 | IEA | GOA Database | protein transport | |
| GO:0051028 | IEA | GOA Database | mRNA transport | |
| GO:0006355 | IBA | Gene Ontology | regulation of transcription, DNA-templated | 1 |
| GO:0000973 | IBA | Gene Ontology | posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery | 1 |
| GO:0006606 | IBA | Gene Ontology | protein import into nucleus | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0017056 | IEA | GOA Database | structural constituent of nuclear pore | |
| GO:0017056 | IBA | Gene Ontology | structural constituent of nuclear pore | 1 |
| GO:0017056 | IEA | InterPro | structural constituent of nuclear pore | |
| GO:0005515 | IPI | Gene Ontology | protein binding | 2 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005643 | IEA | GOA Database | nuclear pore | |
| GO:0005643 | IEA | InterPro | nuclear pore | |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM | Gene Ontology | nucleus | |
| GO:0005635 | IEA | GOA Database | nuclear envelope | |
| GO:0005635 | IDA | Gene Ontology | nuclear envelope | 2 |
| GO:0031080 | IBA | Gene Ontology | nuclear pore outer ring | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR007252 | Nuclear pore protein 84/107 |
| Mapman id | Description |
|---|---|
| 23.5.1.1.1.2 | Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.scaffold nucleoporin (NUP107) |