Gene: SGA_v2.0_scaffold71G23886

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold71G23886
  • Transcript Identifier SGA_v2.0_scaffold71T23886
  • Gene Type Coding gene
  • Location scaffold71 : 933456-947129 : negative

Gene Family Information

  • ID HOM05D001849
  • #Genes/#Species 354/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product DNA binding protein, putative
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048510
ISO
PLAZA Integrative Orthologyregulation of timing of transition from vegetative to reproductive phase AT1G72390
GO:0048574
ISO
PLAZA Integrative Orthologylong-day photoperiodism, flowering AT1G72390
GO:0007623
ISO
PLAZA Integrative Orthologycircadian rhythm AT1G72390
GO:0009416
ISO
PLAZA Integrative Orthologyresponse to light stimulus AT1G72390

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G72390

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G72390
GO:0016604
ISO
PLAZA Integrative Orthologynuclear body AT1G72390
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G72390

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
Mapman id Description
15.3.4.3.3.3 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.SAGA complex.SPT recruitment module.component SPT20/ADA5
16.8.3 RNA processing.mRNA sequestration.mRNA-binding regulatory factor (UBP1)