Gene: PSO386G0247
General Information
Structural Information
- Species Papaver somniferum
- Gene Identifier PSO386G0247
- Transcript Identifier PSO386G0247.01
- Gene Type Coding gene
- Location NW_020624376.1 : 5682380-5687425 : positive
Gene Family Information
- ID HOM05D001849
- #Genes/#Species 354/100
- Phylogenetic origin
- ID ORTHO05D004075
- #Genes/#Species 192/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid rna-XM_026581767.1
- pid XP_026437552.1
- id gene-LOC113335755
Descriptions
- product protein PHYTOCHROME-DEPENDENT LATE-FLOWERING-like, transcript variant X4
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0048510 | ISO | PLAZA Integrative Orthology | regulation of timing of transition from vegetative to reproductive phase | AT1G72390 |
GO:0048574 | ISO | PLAZA Integrative Orthology | long-day photoperiodism, flowering | AT1G72390 |
GO:0007623 | ISO | PLAZA Integrative Orthology | circadian rhythm | AT1G72390 |
GO:0009416 | ISO | PLAZA Integrative Orthology | response to light stimulus | AT1G72390 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003712 | IEA | InterPro | transcription coregulator activity | |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G72390 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0000124 | IEA | InterPro | SAGA complex | |
GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G72390 |
GO:0016604 | ISO | PLAZA Integrative Orthology | nuclear body | AT1G72390 |
GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT1G72390 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR021950 | Transcription factor Spt20 |
Mapman id | Description |
---|---|
15.3.4.3.3.3 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.SAGA complex.SPT recruitment module.component SPT20/ADA5 |