Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p38650 Brassica napus
A06p37450 Brassica napus
A08p33190 Brassica napus
A09p05320 Brassica napus
A09p64300 Brassica napus
Aa31LG11G9230 Aethionema arabicum
Aa31LG1G2860 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2635 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3412 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.3217 Anthoceros agrestis
Actinidia06601 Actinidia chinensis
Actinidia10343 Actinidia chinensis
Actinidia16513 Actinidia chinensis
Actinidia20058 Actinidia chinensis
Actinidia20059 Actinidia chinensis
Actinidia30793 Actinidia chinensis
Ah.02g112000 Amaranthus hybridus
Ah.11g049780 Amaranthus hybridus
AL1G23040 Arabidopsis lyrata
AL1G50890 Arabidopsis lyrata
AL6G39530 Arabidopsis lyrata
AL6G39540 Arabidopsis lyrata
AL8G17390 Arabidopsis lyrata
AL8G17410 Arabidopsis lyrata
Aqoxy3G00711 Aquilegia oxysepala
Aqoxy3G00799 Aquilegia oxysepala
Aqoxy3G02611 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.29QZWB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8W4KMR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AJ67NU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DW9AST Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GWL6G1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LM7JF4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PXJ7J7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VN8WUD Arachis hypogaea
AT1G11870 Arabidopsis thaliana
AT5G27470 Arabidopsis thaliana
ATR0706G137 Amborella trichopoda
ATR0829G131 Amborella trichopoda
Atru.chr13.1122 Acer truncatum
Atru.chr8.1410 Acer truncatum
AUR62011866 Chenopodium quinoa
AUR62018961 Chenopodium quinoa
AUR62024709 Chenopodium quinoa
AUR62027806 Chenopodium quinoa
BcaB03g13225 Brassica carinata
BcaB04g19674 Brassica carinata
BcaB04g19676 Brassica carinata
BcaC03g17790 Brassica carinata
BcaC04g23675 Brassica carinata
BcaNung02448 Brassica carinata
BcaNung04373 Brassica carinata
BolC2t11882H Brassica oleracea
BolC7t44620H Brassica oleracea
BolC8t49129H Brassica oleracea
BolC8t52328H Brassica oleracea
BolC9t53506H Brassica oleracea
BraA02t08841Z Brassica rapa
BraA06t26669Z Brassica rapa
BraA08t35237Z Brassica rapa
BraA09t36170Z Brassica rapa
BraA09t41773Z Brassica rapa
C02p58140 Brassica napus
C07p40910 Brassica napus
C08p14990 Brassica napus
C08p47910 Brassica napus
C09p05790 Brassica napus
CAN.G1077.17 Capsicum annuum
CAN.G1091.2 Capsicum annuum
CAN.G134.54 Capsicum annuum
CAN.G178.2 Capsicum annuum
CAN.G22.15 Capsicum annuum
CAN.G291.12 Capsicum annuum
CAN.G601.6 Capsicum annuum
CAN.G629.6 Capsicum annuum
CAN.G639.23 Capsicum annuum
CAN.G639.30 Capsicum annuum
CAN.G857.9 Capsicum annuum
CAN.G978.7 Capsicum annuum
CANSAT11G0398 Cannabis sativa
CARHR012190 Cardamine hirsuta
CARHR289470 Cardamine hirsuta
Carub.0001s1152 Capsella rubella
Carub.0001s3362 Capsella rubella
Carub.0006s2506 Capsella rubella
Ca_01500_v3 Cicer arietinum L.
Ca_10108_v3 Cicer arietinum L.
Ca_16039_v3 Cicer arietinum L.
CBR_g10918 Chara braunii
CBR_g23814 Chara braunii
Cc00_g13330 Coffea canephora
Cc02_g33530 Coffea canephora
Cc10_g06740 Coffea canephora
CDE02G0667 Ceratophyllum demersum
CDE10G0434 Ceratophyllum demersum
CDE10G0730 Ceratophyllum demersum
CDE11G0426 Ceratophyllum demersum
CDE11G0514 Ceratophyllum demersum
Cfa006580 Carpinus fangiana
Cfa017888 Carpinus fangiana
Cfa023426 Carpinus fangiana
Cfa024582 Carpinus fangiana
Ciclev10000915m.g Citrus clementina
Ciclev10001143m.g Citrus clementina
CiPaw.07G016900 Carya illinoinensis
CiPaw.08G165400 Carya illinoinensis
CiPaw.15G046300 Carya illinoinensis
ClCG03G016950 Citrullus lanatus
ClCG11G014250 Citrullus lanatus
COL.COLO4_05829 Corchorus olitorius
COL.COLO4_06422 Corchorus olitorius
COL.COLO4_12015 Corchorus olitorius
COL.COLO4_17835 Corchorus olitorius
Cpa.g.sc26.176 Carica papaya
Cpa.g.sc36.175 Carica papaya
Cpa.g.sc48.197 Carica papaya
Cre02.g082825 Chlamydomonas reinhardtii
Cre02.g082877 Chlamydomonas reinhardtii
Cre03.g189400 Chlamydomonas reinhardtii
CsaV3_3G047640 Cucumis sativus L.
CsaV3_5G013970 Cucumis sativus L.
CSS0003233 Camellia sinensis var. sinensis
CSS0004915 Camellia sinensis var. sinensis
CSS0004971 Camellia sinensis var. sinensis
CSS0006195 Camellia sinensis var. sinensis
CSS0029145 Camellia sinensis var. sinensis
CSS0032051 Camellia sinensis var. sinensis
CSS0035783 Camellia sinensis var. sinensis
CSS0038561 Camellia sinensis var. sinensis
CSS0049651 Camellia sinensis var. sinensis
DCAR_011444 Daucus carota
DCAR_014069 Daucus carota
DCAR_029748 Daucus carota
Dinv07070 Davidia involucrata
Dinv23948 Davidia involucrata
Dinv40278 Davidia involucrata
Dinv44801 Davidia involucrata
Duzib093G1820 Durio zibethinus
Duzib132G0634 Durio zibethinus
Duzib248G1449 Durio zibethinus
ECA232G4436 Erigeron canadensis
ECA234G0311 Erigeron canadensis
ECA246G0857 Erigeron canadensis
ECA246G2160 Erigeron canadensis
ECA246G3796 Erigeron canadensis
EL10Ac1g01156 Beta vulgaris
EL10As5g23472 Beta vulgaris
Eucgr.F00372 Eucalyptus grandis
Eucgr.H04482 Eucalyptus grandis
FAN02G4035 Fragaria x ananassa
FAN04G1529 Fragaria x ananassa
FAN04G1975 Fragaria x ananassa
FAN05G0374 Fragaria x ananassa
FAN05G2026 Fragaria x ananassa
FAN05G5279 Fragaria x ananassa
FAN08G1454 Fragaria x ananassa
FAN09G3771 Fragaria x ananassa
FAN11G0100 Fragaria x ananassa
FAN13G1337 Fragaria x ananassa
FAN14G1835 Fragaria x ananassa
FAN14G3377 Fragaria x ananassa
FAN18G4557 Fragaria x ananassa
FvH4_3g37770 Fragaria vesca
FvH4_5g36670 Fragaria vesca
FvH4_6g05710 Fragaria vesca
Glyma.04G099400 Glycine max
Glyma.06G101300 Glycine max
Glyma.10G155000 Glycine max
Glyma.20G233300 Glycine max
Gohir.A01G179400 Gossypium hirsutum
Gohir.A03G212700 Gossypium hirsutum
Gohir.A05G223700 Gossypium hirsutum
Gohir.D01G170200 Gossypium hirsutum
Gohir.D02G234200 Gossypium hirsutum
Gohir.D05G226500 Gossypium hirsutum
Gorai.002G211800 Gossypium raimondii
Gorai.005G262200 Gossypium raimondii
Gorai.009G234100 Gossypium raimondii
GSVIVG01000041001 Vitis vinifera
GSVIVG01004302001 Vitis vinifera
GSVIVG01029821001 Vitis vinifera
HanXRQChr04g0099811 Helianthus annuus
HanXRQChr07g0195751 Helianthus annuus
HanXRQChr09g0246831 Helianthus annuus
Haze_04181 Corylus avellana
Haze_18273 Corylus avellana
Haze_18277 Corylus avellana
Haze_26143 Corylus avellana
Hma1.2p1_0617F.1_g190250 Hydrangea macrophylla
Hma1.2p1_0928F.1_g237860 Hydrangea macrophylla
HPP92_000746 Vanilla planifolia
HPP92_000770 Vanilla planifolia
HPP92_015353 Vanilla planifolia
HPP92_015354 Vanilla planifolia
HPP92_015619 Vanilla planifolia
HPP92_026795 Vanilla planifolia
Hund07063 Selenicereus undatus
Hund21240 Selenicereus undatus
Hund26982 Selenicereus undatus
Lalb_Chr11g0065281 Lupinus albus
Lalb_Chr18g0045581 Lupinus albus
Lalb_Chr21g0310711 Lupinus albus
Lj1g0028118 Lotus japonicus
Lj3A823T68 Lonicera japonica
Lj4A726G66 Lonicera japonica
Lj4A97T76 Lonicera japonica
Lj4C97T10 Lonicera japonica
Lj5g0001404 Lotus japonicus
Lj5g0023584 Lotus japonicus
Lj7A664T57 Lonicera japonica
Lsat_1_v5_gn_2_87680 Lactuca sativa
Lsat_1_v5_gn_3_25760 Lactuca sativa
Lsat_1_v5_gn_4_42741 Lactuca sativa
Lsat_1_v5_gn_5_1480 Lactuca sativa
Lsat_1_v5_gn_9_72921 Lactuca sativa
Manes.02G210900 Manihot esculenta
Manes.10G109523 Manihot esculenta
Manes.18G064400 Manihot esculenta
Mapoly0016s0010 Marchantia polymorpha
Mapoly0079s0015 Marchantia polymorpha
MBI04_g30769_MAGBIO Magnolia biondii
MBI04_g31170_MAGBIO Magnolia biondii
MBI04_g31171_MAGBIO Magnolia biondii
MBI04_g35660_MAGBIO Magnolia biondii
MCO07G384 Micromonas commoda
MCO07G674 Micromonas commoda
MD04G1206100 Malus domestica
MD04G1206400 Malus domestica
MD08G1187900 Malus domestica
MD10G1285400 Malus domestica
MD12G1220200 Malus domestica
MD15G1373800 Malus domestica
Medtr1g082850 Medicago truncatula
Medtr3g099470 Medicago truncatula
Medtr7g029025 Medicago truncatula
MELO3C003560.2 Cucumis melo
MELO3C026449.2 Cucumis melo
Migut.D01115 Erythranthe guttata
Migut.F00862 Erythranthe guttata
MSTRG.27559 Avicennia marina
Nitab4.5_0000786g0120 Nicotiana tabacum
Nitab4.5_0005388g0030 Nicotiana tabacum
Nitab4.5_0008677g0040 Nicotiana tabacum
Nitab4.5_0010488g0020 Nicotiana tabacum
Nn1g02214 Nelumbo nucifera
Nn3g19226 Nelumbo nucifera
Nn4g26239 Nelumbo nucifera
Oeu008907.1 Olea europaea
Oeu016077.1 Olea europaea
Os01g0559100 Oryza sativa ssp. japonica
Os03g0198400 Oryza sativa ssp. japonica
Os11g0610900 Oryza sativa ssp. japonica
Peaxi162Scf00030g02221 Petunia axillaris
Peaxi162Scf00037g00237 Petunia axillaris
PGR031G2902 Punica granatum
PGR044G2367 Punica granatum
PGSC0003DMG400013479 Solanum tuberosum
PGSC0003DMG400013480 Solanum tuberosum
PGSC0003DMG401006542 Solanum tuberosum
PGSC0003DMG401030816 Solanum tuberosum
PGSC0003DMG402028588 Solanum tuberosum
PGSC0003DMG402030816 Solanum tuberosum
Phvul.007G180500 Phaseolus vulgaris
Phvul.009G032700 Phaseolus vulgaris
Potri.002G100300 Populus trichocarpa
Potri.005G094400 Populus trichocarpa
Potri.007G070501 Populus trichocarpa
Pp3c13_16820 Physcomitrium patens
Pp3c3_17030 Physcomitrium patens
Pp3c4_17270 Physcomitrium patens
Pp3c5_28560 Physcomitrium patens
PRCOL_00002676 Prasinoderma coloniale
PRCOL_00005275 Prasinoderma coloniale
Prupe.1G522400 Prunus persica
Prupe.6G327000 Prunus persica
Psat5g050600 Pisum sativum
Psat6g135360 Pisum sativum
Psat6g149440 Pisum sativum
Psat6g149680 Pisum sativum
Psat7g214320 Pisum sativum
PSO017G6936 Papaver somniferum
PSO063G1969 Papaver somniferum
PSO210G1133 Papaver somniferum
PSO210G6516 Papaver somniferum
PSO675G3495 Papaver somniferum
PSO675G6372 Papaver somniferum
PSO782G4258 Papaver somniferum
PSO832G0951 Papaver somniferum
QL02p001500 Quercus lobata
QL02p002533 Quercus lobata
QL03p006890 Quercus lobata
QL03p047114 Quercus lobata
QL06p003654 Quercus lobata
RcHm_v2.0_Chr2g0115881 Rosa chinensis
RcHm_v2.0_Chr3g0454601 Rosa chinensis
RcHm_v2.0_Chr7g0242571 Rosa chinensis
Rhsim01G0058000 Rhododendron simsii
Rhsim01G0059500 Rhododendron simsii
Rhsim02G0144200 Rhododendron simsii
Rhsim06G0078100 Rhododendron simsii
Rhsim07G0204900 Rhododendron simsii
Sabra05G0078200 Salix brachista
SalBow3G2039 Salvia bowleyana
SalBow4G2898 Salvia bowleyana
Sc01g0000750 Simmondsia chinensis
Sc06g0003380 Simmondsia chinensis
Sc16g0008440 Simmondsia chinensis
Sed0000871 Sechium edule
Sed0003211 Sechium edule
Sed0016587 Sechium edule
SEGI_01941 Sequoiadendron giganteum
SEGI_05166 Sequoiadendron giganteum
SEGI_10175 Sequoiadendron giganteum
SEGI_34874 Sequoiadendron giganteum
SGA_v2.0_scaffold354G49726 Striga asiatica
SGA_v2.0_scaffold37G14719 Striga asiatica
SGA_v2.0_scaffold5G02779 Striga asiatica
SGA_v2.0_scaffold5G02920 Striga asiatica
SMO118G0093 Selaginella moellendorffii
SMO146G0126 Selaginella moellendorffii
Solyc01g098880.3 Solanum lycopersicum
Solyc04g074630.4 Solanum lycopersicum
Solyc04g079870.2 Solanum lycopersicum
Sopen01g042420 Solanum pennellii
Sopen04g029600 Solanum pennellii
Sopen04g033440 Solanum pennellii
Sopen04g033740 Solanum pennellii
Sopen09g008700 Solanum pennellii
Sp1g10490 Schrenkiella parvula
Sp2g09790 Schrenkiella parvula
Sp2g20690 Schrenkiella parvula
Sp3g30420 Schrenkiella parvula
Sp6g20110 Schrenkiella parvula
TAR362G0657 Trochodendron aralioides
TAR365G0532 Trochodendron aralioides
TAR629G1329 Trochodendron aralioides
THA.LOC104814183 Tarenaya hassleriana
THA.LOC104818684 Tarenaya hassleriana
THA.LOC104821709 Tarenaya hassleriana
Thecc.02G035000 Theobroma cacao
Thecc.04G225800 Theobroma cacao
Thecc.08G102800 Theobroma cacao
Thhalv10004203m.g Eutrema salsugineum
Thhalv10009769m.g Eutrema salsugineum
Thhalv10029181m.g Eutrema salsugineum
TPR.G14125 Trifolium pratense
TWI36G0174 Tripterygium wilfordii
TWI56G0634 Tripterygium wilfordii
unitig_37.g12350 Utricularia gibba
unitig_46.g18641 Utricularia gibba
unitig_46.g18642 Utricularia gibba
unitig_90.g27543 Utricularia gibba
vmacro04712 Vaccinium macrocarpon
vmacro04723 Vaccinium macrocarpon
vmacro04728 Vaccinium macrocarpon
vmacro12777 Vaccinium macrocarpon
vmacro21293 Vaccinium macrocarpon
VMungo0720G0527 Vigna mungo
VMungo1309G0728 Vigna mungo
Zm00001eb113140 Zea mays
Zm00001eb166980 Zea mays
Zm00001eb344690 Zea mays
Zm00001eb384020 Zea mays
Zm00001eb400980 Zea mays
Zm00001eb433060 Zea mays

User provided reference genes

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