Gene: Solyc04g074630.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc04g074630.4
  • Transcript Identifier Solyc04g074630.4.1
  • Gene Type Coding gene
  • Location SL4.0ch04 : 58524853-58529161 : positive

Gene Family Information

  • ID HOM05D001790
  • #Genes/#Species 365/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc04g074630.4.1
  • uniprot A0A3Q7G8L2
  • gene_id Solyc04g074630

Descriptions

  • Description Serine--tRNA ligase (AHRD V3.3 *** A0A2G2WZW7_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006418
IEA
GOA DatabasetRNA aminoacylation for protein translation
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0007005
ISO
PLAZA Integrative Orthologymitochondrion organization AT1G11870
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT1G11870
GO:0048481
ISO
PLAZA Integrative Orthologyplant ovule development AT1G11870
GO:0043039
ISO
PLAZA Integrative OrthologytRNA aminoacylation AT1G11870
GO:0006434
IBA
IEA
GOA Databaseseryl-tRNA aminoacylation
GO:0006434
IEA
InterProseryl-tRNA aminoacylation
GO:0070158
IBA
GOA Databasemitochondrial seryl-tRNA aminoacylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004828
IBA
IEA
GOA Databaseserine-tRNA ligase activity
GO:0004828
IEA
InterProserine-tRNA ligase activity
GO:0000049
IBA
GOA DatabasetRNA binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004812
IEA
GOA Databaseaminoacyl-tRNA ligase activity
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0016874
IEA
GOA Databaseligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G11870
GO:0005739
IBA
GOA Databasemitochondrion

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm
IPR033729 Serine-tRNA ligase catalytic core domain
IPR002317 Serine-tRNA ligase, type1
IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily
IPR015866 Serine-tRNA synthetase, type1, N-terminal
IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
Mapman id Description
17.2.18 Protein biosynthesis.aminoacyl-tRNA synthetase activities.serine-tRNA ligase