Gene: Cc10_g06740
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc10_g06740
- Transcript Identifier Cc10_g06740.1
- Gene Type Coding gene
- Location chr10 : 5571863-5575852 : negative
Gene Family Information
- ID HOM05D001790
- #Genes/#Species 365/99
- Phylogenetic origin
- ID ORTHO05D007425
- #Genes/#Species 131/92
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- UniProtKB G7J3Z0
- UniProtKB Q73KB2
- UniProtKB B9GUZ6
- UniProtKB B8E0R9
- UniProtKB A9PFH5
- UniProtKB Q1AX26
- id GSCOCG00034617001
Descriptions
- Description Serine--tRNA ligase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006434 | IEA | InterPro | seryl-tRNA aminoacylation | |
| GO:0006418 | IEA | InterPro | tRNA aminoacylation for protein translation | |
| GO:0043039 | ISO | PLAZA Integrative Orthology | tRNA aminoacylation | AT1G11870 |
| GO:0048481 | ISO | PLAZA Integrative Orthology | plant ovule development | AT1G11870 |
| GO:0009658 | ISO | PLAZA Integrative Orthology | chloroplast organization | AT1G11870 |
| GO:0007005 | ISO | PLAZA Integrative Orthology | mitochondrion organization | AT1G11870 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000166 | IEA | InterPro | nucleotide binding | |
| GO:0004828 | IEA | InterPro | serine-tRNA ligase activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0004812 | IEA | InterPro | aminoacyl-tRNA ligase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT1G11870 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT1G11870 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002317 | Serine-tRNA ligase, type1 |
| IPR002314 | Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) |
| IPR042103 | Serine-tRNA synthetase, type1, N-terminal domain superfamily |
| IPR015866 | Serine-tRNA synthetase, type1, N-terminal |
| IPR010978 | Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm |
| IPR033729 | Serine-tRNA ligase catalytic core domain |
| Mapman id | Description |
|---|---|
| 17.2.18 | Protein biosynthesis.aminoacyl-tRNA synthetase activities.serine-tRNA ligase |