Gene: Sopen04g029600

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g029600
  • Transcript Identifier Sopen04g029600.1
  • Gene Type Coding gene
  • Location Spenn-ch04 : 71153144-71169462 : positive

Gene Family Information

  • ID HOM05D001790
  • #Genes/#Species 365/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g029600.1

Descriptions

  • Description Seryl-tRNA synthetase targeted to chloroplasts and mitochondria. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana. | Seryl-tRNA synthetase (SRS) | FUNCTIONS IN: serine-tRNA ligase activity | INVOLVED IN: chloroplast organization, mitochondrion organization, seryl-tRNA aminoacylation, tRNA aminoacylation, ovule development | LOCATED IN: mitochondrion, chloroplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: tRNA-binding arm , Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain , Seryl-tRNA synthetase, class IIa, N-terminal , Seryl-tRNA synthetase, class IIa , Ubiquitin supergroup , Aminoacyl-tRNA synthetase, class II, conserved domain , Seryl-tRNA synthetase, class IIa, C-terminal | BEST Arabidopsis thaliana protein match is: seryl-tRNA synthetase / serine--tRNA ligase
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0006434
IEA
InterProseryl-tRNA aminoacylation
GO:0043039
ISO
PLAZA Integrative OrthologytRNA aminoacylation AT1G11870
GO:0048481
ISO
PLAZA Integrative Orthologyplant ovule development AT1G11870
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT1G11870
GO:0007005
ISO
PLAZA Integrative Orthologymitochondrion organization AT1G11870

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
InterPronucleotide binding
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0005524
IEA
InterProATP binding
GO:0004828
IEA
InterProserine-tRNA ligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G11870
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT1G11870

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015866 Serine-tRNA synthetase, type1, N-terminal
IPR033729 Serine-tRNA ligase catalytic core domain
IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
IPR002317 Serine-tRNA ligase, type1
IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily
IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm
Mapman id Description
17.2.18 Protein biosynthesis.aminoacyl-tRNA synthetase activities.serine-tRNA ligase