Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p06320 Brassica napus
A02p39060 Brassica napus
A03p10130 Brassica napus
A03p34330 Brassica napus
A06p36930 Brassica napus
A10p19430 Brassica napus
Aa31LG1G14110 Aethionema arabicum
Aa31LG4G13270 Aethionema arabicum
Aa31sc1017G30 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.484 Anthoceros agrestis
Actinidia01661 Actinidia chinensis
Actinidia24722 Actinidia chinensis
Actinidia26021 Actinidia chinensis
Actinidia29936 Actinidia chinensis
Actinidia30225 Actinidia chinensis
Actinidia38483 Actinidia chinensis
Ah.06g190750 Amaranthus hybridus
Ah.08g216930 Amaranthus hybridus
AL3G16630 Arabidopsis lyrata
AL6G32110 Arabidopsis lyrata
AL8G16030 Arabidopsis lyrata
Aqoxy24s001 Aquilegia oxysepala
Aqoxy7G01032 Aquilegia oxysepala
Aqoxy7G04102 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6GV0UE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.81C4YJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.87UIUZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8AY919 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NCJ5VK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TA4VKK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X5TQ0U Arachis hypogaea
AT3G05870 Arabidopsis thaliana
AT3G42830 Arabidopsis thaliana
AT5G20570 Arabidopsis thaliana
AT5G26640 Arabidopsis thaliana
ATR0598G082 Amborella trichopoda
Atru.chr1.4005 Acer truncatum
Atru.chr1.4022 Acer truncatum
Atru.chr7.1715 Acer truncatum
AUR62000480 Chenopodium quinoa
AUR62001466 Chenopodium quinoa
AUR62006823 Chenopodium quinoa
AUR62009903 Chenopodium quinoa
AUR62028931 Chenopodium quinoa
AUR62030733 Chenopodium quinoa
BcaB01g04781 Brassica carinata
BcaB05g22003 Brassica carinata
BcaB05g22831 Brassica carinata
BcaB07g29943 Brassica carinata
BcaB08g36510 Brassica carinata
BcaC03g13773 Brassica carinata
BcaC03g17836 Brassica carinata
BcaC04g19445 Brassica carinata
BcaNung03684 Brassica carinata
BcaNung03905 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p01510 Brassica napus
BolC2t07049H Brassica oleracea
BolC2t11928H Brassica oleracea
BolC3t13638H Brassica oleracea
BolC7t44690H Brassica oleracea
BolC9t58431H Brassica oleracea
BraA02t05580Z Brassica rapa
BraA02t08875Z Brassica rapa
BraA03t10324Z Brassica rapa
BraA06t26618Z Brassica rapa
BraA10t44020Z Brassica rapa
C02p58680 Brassica napus
C03p11670 Brassica napus
C07p41570 Brassica napus
C09p55650 Brassica napus
CAN.G1248.13 Capsicum annuum
CAN.G1661.14 Capsicum annuum
CAN.G862.52 Capsicum annuum
CANSAT54G1905 Cannabis sativa
CANSAT56G3151 Cannabis sativa
CARHR080330 Cardamine hirsuta
CARHR153790 Cardamine hirsuta
CARHR192230 Cardamine hirsuta
Carub.0003s0524 Capsella rubella
Carub.0005s0519 Capsella rubella
Carub.0005s0888 Capsella rubella
Carub.0006s1889 Capsella rubella
Ca_01594_v3 Cicer arietinum L.
Ca_26240_v3 Cicer arietinum L.
Ca_30044_v3 Cicer arietinum L.
CBR_g16074 Chara braunii
Cc00_g19110 Coffea canephora
Cc06_g12220 Coffea canephora
Cc10_g10070 Coffea canephora
Cc11_g00800 Coffea canephora
CDE04G1158 Ceratophyllum demersum
CDE05G1906 Ceratophyllum demersum
CDE06G1780 Ceratophyllum demersum
Cfa002981 Carpinus fangiana
Ciclev10006206m.g Citrus clementina
Ciclev10009952m.g Citrus clementina
Ciclev10026815m.g Citrus clementina
CiPaw.01G001400 Carya illinoinensis
CiPaw.01G217300 Carya illinoinensis
CiPaw.03G205500 Carya illinoinensis
CiPaw.04G142700 Carya illinoinensis
ClCG03G015040 Citrullus lanatus
ClCG09G010060 Citrullus lanatus
ClCG11G001410 Citrullus lanatus
COL.COLO4_04114 Corchorus olitorius
COL.COLO4_18091 Corchorus olitorius
COL.COLO4_31771 Corchorus olitorius
Cpa.g.sc28.28 Carica papaya
Cre12.g543450 Chlamydomonas reinhardtii
Cre13.g590900 Chlamydomonas reinhardtii
CsaV3_1G041100 Cucumis sativus L.
CsaV3_2G001130 Cucumis sativus L.
CsaV3_7G024700 Cucumis sativus L.
CSS0009614 Camellia sinensis var. sinensis
CSS0010750 Camellia sinensis var. sinensis
CSS0014183 Camellia sinensis var. sinensis
CSS0017239 Camellia sinensis var. sinensis
CSS0021426 Camellia sinensis var. sinensis
CSS0043752 Camellia sinensis var. sinensis
DCAR_016113 Daucus carota
DCAR_022690 Daucus carota
DCAR_025400 Daucus carota
DCAR_026418 Daucus carota
Dinv03875 Davidia involucrata
Dinv20422 Davidia involucrata
Dinv25552 Davidia involucrata
Dinv37859 Davidia involucrata
Dinv42398 Davidia involucrata
Duzib150G0226 Durio zibethinus
Duzib168G2078 Durio zibethinus
Duzib168G2143 Durio zibethinus
Duzib170G0793 Durio zibethinus
Duzib187G1132 Durio zibethinus
Duzib235G1009 Durio zibethinus
ECA232G3361 Erigeron canadensis
ECA232G3954 Erigeron canadensis
ECA236G3263 Erigeron canadensis
ECA247G3585 Erigeron canadensis
EL10Ac4g09568 Beta vulgaris
EL10Ac7g16424 Beta vulgaris
EL10Ac8g19052 Beta vulgaris
Eucgr.C00801 Eucalyptus grandis
Eucgr.C03261 Eucalyptus grandis
Eucgr.C03326 Eucalyptus grandis
FAN01G0950 Fragaria x ananassa
FAN02G1014 Fragaria x ananassa
FAN02G1833 Fragaria x ananassa
FAN03G0771 Fragaria x ananassa
FAN03G0799 Fragaria x ananassa
FAN03G1031 Fragaria x ananassa
FAN05G0725 Fragaria x ananassa
FAN05G3529 Fragaria x ananassa
FAN06G1638 Fragaria x ananassa
FAN06G1827 Fragaria x ananassa
FAN06G2340 Fragaria x ananassa
FAN06G2807 Fragaria x ananassa
FAN09G2109 Fragaria x ananassa
FAN09G4621 Fragaria x ananassa
FAN10G0577 Fragaria x ananassa
FAN10G3343 Fragaria x ananassa
FAN14G0262 Fragaria x ananassa
FAN14G1181 Fragaria x ananassa
FvH4_6g08560 Fragaria vesca
FvH4_6g43400 Fragaria vesca
FvH4_7g02520 Fragaria vesca
FvH4_7g12780 Fragaria vesca
FvH4_7g12820 Fragaria vesca
Glyma.06G303600 Glycine max
Glyma.10G142800 Glycine max
Glyma.12G100300 Glycine max
Glyma.12G194500 Glycine max
Glyma.13G265400 Glycine max
Glyma.13G308100 Glycine max
Glyma.20G091400 Glycine max
Gohir.A05G034200 Gossypium hirsutum
Gohir.A07G015100 Gossypium hirsutum
Gohir.A08G246000 Gossypium hirsutum
Gohir.A13G217750 Gossypium hirsutum
Gohir.D05G035600 Gossypium hirsutum
Gohir.D07G014800 Gossypium hirsutum
Gohir.D08G267000 Gossypium hirsutum
Gohir.D13G221500 Gossypium hirsutum
Gorai.001G015600 Gossypium raimondii
Gorai.004G284800 Gossypium raimondii
Gorai.009G036200 Gossypium raimondii
Gorai.013G252500 Gossypium raimondii
GSVIVG01015070001 Vitis vinifera
GSVIVG01016736001 Vitis vinifera
GSVIVG01026815001 Vitis vinifera
GSVIVG01031335001 Vitis vinifera
HanXRQChr07g0185791 Helianthus annuus
HanXRQChr07g0185801 Helianthus annuus
HanXRQChr09g0276821 Helianthus annuus
HanXRQChr12g0354381 Helianthus annuus
HanXRQChr13g0393141 Helianthus annuus
HanXRQChr13g0394881 Helianthus annuus
HanXRQChr16g0501661 Helianthus annuus
Haze_15020 Corylus avellana
Haze_26020 Corylus avellana
Haze_26130 Corylus avellana
Haze_27589 Corylus avellana
Haze_27715 Corylus avellana
Hma1.2p1_0179F.1_g079490 Hydrangea macrophylla
HPP92_004864 Vanilla planifolia
HPP92_008299 Vanilla planifolia
Hund07269 Selenicereus undatus
Hund08812 Selenicereus undatus
Hund18684 Selenicereus undatus
Hund21831 Selenicereus undatus
Lalb_Chr01g0005601 Lupinus albus
Lalb_Chr03g0028791 Lupinus albus
Lalb_Chr19g0135761 Lupinus albus
Lalb_Chr21g0310021 Lupinus albus
Lj3g0003676 Lotus japonicus
Lj3g0008163 Lotus japonicus
Lj3g0021936 Lotus japonicus
Lj4g0014736 Lotus japonicus
Lj5g0007829 Lotus japonicus
Lsat_1_v5_gn_1_38380 Lactuca sativa
Lsat_1_v5_gn_4_94220 Lactuca sativa
Lsat_1_v5_gn_5_140521 Lactuca sativa
Lsat_1_v5_gn_5_34581 Lactuca sativa
Manes.04G146000 Manihot esculenta
Manes.08G107200 Manihot esculenta
Manes.09G181600 Manihot esculenta
Manes.11G019000 Manihot esculenta
Mapoly0001s0330 Marchantia polymorpha
Mapoly0112s0013 Marchantia polymorpha
MBI03_g03003_MAGBIO Magnolia biondii
MBI13_g29517_MAGBIO Magnolia biondii
MBI13_g35416_MAGBIO Magnolia biondii
MBI15_g39944_MAGBIO Magnolia biondii
MBI18_g25058_MAGBIO Magnolia biondii
MBI18_g25061_MAGBIO Magnolia biondii
MCO01G572 Micromonas commoda
MCO02G295 Micromonas commoda
MD02G1195900 Malus domestica
MD02G1196400 Malus domestica
MD04G1186000 Malus domestica
MD05G1140700 Malus domestica
MD07G1125100 Malus domestica
MD12G1199400 Malus domestica
Medtr2g088570 Medicago truncatula
Medtr4g007410 Medicago truncatula
Medtr4g046877 Medicago truncatula
Medtr7g005900 Medicago truncatula
MELO3C004656.2 Cucumis melo
MELO3C015525.2 Cucumis melo
MELO3C028650.2 Cucumis melo
Migut.D01691 Erythranthe guttata
Migut.J00922 Erythranthe guttata
Migut.L01569 Erythranthe guttata
MSTRG.26473 Avicennia marina
Nitab4.5_0000073g0130 Nicotiana tabacum
Nitab4.5_0000081g0250 Nicotiana tabacum
Nitab4.5_0000343g0250 Nicotiana tabacum
Nitab4.5_0001463g0140 Nicotiana tabacum
Nitab4.5_0002516g0040 Nicotiana tabacum
Nitab4.5_0002572g0010 Nicotiana tabacum
Nitab4.5_0002898g0040 Nicotiana tabacum
Nitab4.5_0005225g0040 Nicotiana tabacum
Nitab4.5_0006117g0020 Nicotiana tabacum
Nn3g21965 Nelumbo nucifera
Oeu023882.1 Olea europaea
Oeu035622.1 Olea europaea
Oeu061907.1 Olea europaea
Oeu062794.1 Olea europaea
Oeu062796.1 Olea europaea
Oeu063451.1 Olea europaea
Os01g0106800 Oryza sativa ssp. japonica
Os02g0708300 Oryza sativa ssp. japonica
Os03g0302700 Oryza sativa ssp. japonica
Os07g0411200 Oryza sativa ssp. japonica
Peaxi162Scf00038g02032 Petunia axillaris
Peaxi162Scf00194g00020 Petunia axillaris
Peaxi162Scf00348g00109 Petunia axillaris
Peaxi162Scf00928g00025 Petunia axillaris
Peaxi162Scf05436g00001 Petunia axillaris
PGR142G3386 Punica granatum
PGR142G3611 Punica granatum
PGSC0003DMG400004861 Solanum tuberosum
PGSC0003DMG400018281 Solanum tuberosum
PGSC0003DMG400027099 Solanum tuberosum
Phvul.005G076901 Phaseolus vulgaris
Phvul.005G114500 Phaseolus vulgaris
Phvul.007G205800 Phaseolus vulgaris
Phvul.011G105100 Phaseolus vulgaris
Potri.001G167400 Populus trichocarpa
Potri.003G067100 Populus trichocarpa
Potri.006G141300 Populus trichocarpa
Potri.017G037701 Populus trichocarpa
Pp3c11_19170 Physcomitrium patens
Pp3c12_19260 Physcomitrium patens
Pp3c19_5710 Physcomitrium patens
Pp3c7_7210 Physcomitrium patens
PRCOL_00003509 Prasinoderma coloniale
PRCOL_00004902 Prasinoderma coloniale
Prupe.2G083700 Prunus persica
Prupe.2G152300 Prunus persica
Prupe.2G152700 Prunus persica
Prupe.6G303800 Prunus persica
Psat5g264520 Pisum sativum
Psat7g153280 Pisum sativum
PSO063G3394 Papaver somniferum
PSO135G0140 Papaver somniferum
PSO421G0080 Papaver somniferum
PSO724G0407 Papaver somniferum
PSO729G0020 Papaver somniferum
PSO761G0719 Papaver somniferum
QL05p004009 Quercus lobata
QL11p000957 Quercus lobata
RcHm_v2.0_Chr1g0313131 Rosa chinensis
RcHm_v2.0_Chr1g0321161 Rosa chinensis
RcHm_v2.0_Chr1g0321441 Rosa chinensis
RcHm_v2.0_Chr1g0351811 Rosa chinensis
RcHm_v2.0_Chr1g0351851 Rosa chinensis
RcHm_v2.0_Chr2g0149921 Rosa chinensis
RcHm_v2.0_Chr3g0458621 Rosa chinensis
Rhsim03G0227300 Rhododendron simsii
Rhsim05G0007200 Rhododendron simsii
Rhsim11G0105600 Rhododendron simsii
Rhsim12G0210500 Rhododendron simsii
Rhsim12G0210900 Rhododendron simsii
Sabra01G0125900 Salix brachista
Sabra03G0039200 Salix brachista
Sabra06G0110500 Salix brachista
SalBow5G2149 Salvia bowleyana
SalBow5G5131 Salvia bowleyana
SalBow6G2559 Salvia bowleyana
Sc12g0010650 Simmondsia chinensis
Sc18g0002610 Simmondsia chinensis
Sed0008097 Sechium edule
Sed0008869 Sechium edule
Sed0021388 Sechium edule
Sed0021503 Sechium edule
SEGI_16037 Sequoiadendron giganteum
SEGI_36157 Sequoiadendron giganteum
SGA_v2.0_scaffold117G32418 Striga asiatica
SGA_v2.0_scaffold21G09493 Striga asiatica
SGA_v2.0_scaffold279G46779 Striga asiatica
SGA_v2.0_scaffold609G53177 Striga asiatica
SHI10338 Sapria himalayana
SHI26854 Sapria himalayana
SMO356G0205 Selaginella moellendorffii
Solyc06g062940.4 Solanum lycopersicum
Solyc12g009120.2 Solanum lycopersicum
Sopen06g022390 Solanum pennellii
Sopen12g004070 Solanum pennellii
Sp3g04760 Schrenkiella parvula
Sp6g23910 Schrenkiella parvula
SpUn0007_0070 Schrenkiella parvula
SpUn0013_0100 Schrenkiella parvula
TAR624G0018 Trochodendron aralioides
TAR626G0050 Trochodendron aralioides
THA.LOC104808880 Tarenaya hassleriana
THA.LOC104811002 Tarenaya hassleriana
THA.LOC104815338 Tarenaya hassleriana
THA.LOC104818757 Tarenaya hassleriana
THA.LOC104822520 Tarenaya hassleriana
THA.LOC104826593 Tarenaya hassleriana
Thecc.09G075900 Theobroma cacao
Thecc.09G243500 Theobroma cacao
Thhalv10005548m.g Eutrema salsugineum
Thhalv10009688m.g Eutrema salsugineum
Thhalv10015047m.g Eutrema salsugineum
TPR.G14231 Trifolium pratense
TPR.G3331 Trifolium pratense
TPR.G39597 Trifolium pratense
TPR.G40407 Trifolium pratense
TPR.G40472 Trifolium pratense
TPR.G4597 Trifolium pratense
TWI32G1305 Tripterygium wilfordii
TWI36G1680 Tripterygium wilfordii
TWI59G1173 Tripterygium wilfordii
TWI63G1773 Tripterygium wilfordii
TWI75G1241 Tripterygium wilfordii
unitig_21.g20999 Utricularia gibba
unitig_699.g19433 Utricularia gibba
unitig_8.g2972 Utricularia gibba
vmacro01666 Vaccinium macrocarpon
vmacro06346 Vaccinium macrocarpon
vmacro14356 Vaccinium macrocarpon
vmacro17205 Vaccinium macrocarpon
vmacro22032 Vaccinium macrocarpon
VMungo1080G1527 Vigna mungo
VMungo1127G0331 Vigna mungo
Zm00001eb126700 Zea mays
Zm00001eb188540 Zea mays
Zm00001eb334390 Zea mays

User provided reference genes

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