Gene: SGA_v2.0_scaffold21G09493
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold21G09493
- Transcript Identifier SGA_v2.0_scaffold21T09493
- Gene Type Coding gene
- Location scaffold21 : 1738583-1740515 : positive
Gene Family Information
- ID HOM05D001662
- #Genes/#Species 389/99
- Phylogenetic origin
- ID ORTHO05D002900
- #Genes/#Species 255/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
Descriptions
- product RING-box protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009733 | ISO | PLAZA Integrative Orthology | response to auxin | AT5G20570 |
GO:0016567 | ISO | PLAZA Integrative Orthology | protein ubiquitination | AT5G20570 |
GO:0006511 | ISO | PLAZA Integrative Orthology | ubiquitin-dependent protein catabolic process | AT3G42830 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0008270 | IEA | InterPro | zinc ion binding | |
GO:0004842 | ISO | PLAZA Integrative Orthology | ubiquitin-protein transferase activity | AT3G42830 |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G20570 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0000151 | ISO | PLAZA Integrative Orthology | ubiquitin ligase complex | AT3G42830 |
GO:0019005 | ISO | PLAZA Integrative Orthology | SCF ubiquitin ligase complex | AT5G20570 |
GO:0031463 | ISO | PLAZA Integrative Orthology | Cul3-RING ubiquitin ligase complex | AT5G20570 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
19.2.2.3.4.1 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.RUB/NEDD8 conjugation (neddylation).RUB ligase E3 activities.RUB ligase E3 protein (RBX1) |
19.2.2.8.1.3 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.UBQ-E2-recruiting component RBX1 |