Gene: Lsat_1_v5_gn_1_38380
General Information
Structural Information
- Species Lactuca sativa
- Gene Identifier Lsat_1_v5_gn_1_38380
- Transcript Identifier Lsat_1_v5_gn_1_38380.2
- Gene Type Coding gene
- Location Lsat_1_v8_lg_1 : 43444524-43446193 : negative
Gene Family Information
- ID HOM05D001662
- #Genes/#Species 389/99
- Phylogenetic origin
- ID ORTHO05D002900
- #Genes/#Species 255/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Lsat_1_v5_gn_1_38380.v5
- pacid 38945847
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009733 | ISO | PLAZA Integrative Orthology | response to auxin | AT5G20570 |
| GO:0016567 | ISO | PLAZA Integrative Orthology | protein ubiquitination | AT5G20570 |
| GO:0006511 | ISO | PLAZA Integrative Orthology | ubiquitin-dependent protein catabolic process | AT3G42830 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004842 | ISO | PLAZA Integrative Orthology | ubiquitin-protein transferase activity | AT3G42830 |
| GO:0008270 | ISO | PLAZA Homology (enrichment) | zinc ion binding | HOM05D001662 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G20570 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000151 | ISO | PLAZA Integrative Orthology | ubiquitin ligase complex | AT3G42830 |
| GO:0019005 | ISO | PLAZA Integrative Orthology | SCF ubiquitin ligase complex | AT5G20570 |
| GO:0031463 | ISO | PLAZA Integrative Orthology | Cul3-RING ubiquitin ligase complex | AT5G20570 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
No InterPro domains detected for this gene.
| Mapman id | Description |
|---|---|
| 35.2 | not assigned.not annotate |