Gene: Lsat_1_v5_gn_5_140521

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_5_140521
  • Transcript Identifier Lsat_1_v5_gn_5_140521.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_5 : 269954606-269957609 : negative

Gene Family Information

  • ID HOM05D001662
  • #Genes/#Species 389/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_5_140521.v5
  • pacid 38970097

Descriptions

  • Description K03868 - RING-box protein 1 (RBX1, ROC1)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT5G20570
GO:0016567
ISO
PLAZA Integrative Orthologyprotein ubiquitination AT5G20570

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
InterProzinc ion binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G20570

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019005
ISO
PLAZA Integrative OrthologySCF ubiquitin ligase complex AT5G20570
GO:0031463
ISO
PLAZA Integrative OrthologyCul3-RING ubiquitin ligase complex AT5G20570

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR024766 Zinc finger, RING-H2-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
19.2.2.3.4.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.RUB/NEDD8 conjugation (neddylation).RUB ligase E3 activities.RUB ligase E3 protein (RBX1)
19.2.2.8.1.3 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.UBQ-E2-recruiting component RBX1