Gene: Sopen12g004070
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen12g004070
- Transcript Identifier Sopen12g004070.1
- Gene Type Coding gene
- Location Spenn-ch12 : 2696261-2699234 : positive
Gene Family Information
- ID HOM05D001662
- #Genes/#Species 389/99
- Phylogenetic origin
- ID ORTHO05D002900
- #Genes/#Species 255/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen12g004070.1
Descriptions
- Description Encodes a ring-box 1 like protein and component of the SCF ubiquitinization complex mediating auxin responses. Forms a E3 ubiquitin ligase complex with CUL3A and At1g21780.1 a BTB domain protein. | RING-box 1 (RBX1) | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009733 | ISO | PLAZA Integrative Orthology | response to auxin | AT5G20570 |
| GO:0016567 | ISO | PLAZA Integrative Orthology | protein ubiquitination | AT5G20570 |
| GO:0006511 | ISO | PLAZA Integrative Orthology | ubiquitin-dependent protein catabolic process | AT3G42830 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0004842 | ISO | PLAZA Integrative Orthology | ubiquitin-protein transferase activity | AT3G42830 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G20570 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000151 | ISO | PLAZA Integrative Orthology | ubiquitin ligase complex | AT3G42830 |
| GO:0019005 | ISO | PLAZA Integrative Orthology | SCF ubiquitin ligase complex | AT5G20570 |
| GO:0031463 | ISO | PLAZA Integrative Orthology | Cul3-RING ubiquitin ligase complex | AT5G20570 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 19.2.2.3.4.1 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.RUB/NEDD8 conjugation (neddylation).RUB ligase E3 activities.RUB ligase E3 protein (RBX1) |
| 19.2.2.8.1.3 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.UBQ-E2-recruiting component RBX1 |