Gene: Pp3c7_7210
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c7_7210
- Transcript Identifier Pp3c7_7210V3.1
- Gene Type Coding gene
- Location Chr07 : 4503178-4504004 : positive
Gene Family Information
- ID HOM05D001662
- #Genes/#Species 389/99
- Phylogenetic origin
- ID ORTHO05D002900
- #Genes/#Species 255/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name Pp3c7_7210V3.1
- pacid 32926377
- alias Phypa_122839
- alias Pp1s42_194V6
- alias Phpat.007G033700
- uniprot A0A2K1KAT7
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006511 | IBA | GOA Database | ubiquitin-dependent protein catabolic process | |
| GO:0016567 | IBA | GOA Database | protein ubiquitination | |
| GO:0009733 | ISO | PLAZA Integrative Orthology | response to auxin | AT5G20570 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008270 | IEA | GOA Database | zinc ion binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0097602 | IBA | GOA Database | cullin family protein binding | |
| GO:0061630 | IBA | GOA Database | ubiquitin protein ligase activity | |
| GO:0004842 | ISO | PLAZA Integrative Orthology | ubiquitin-protein transferase activity | AT3G42830 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G20570 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031461 | IBA | GOA Database | cullin-RING ubiquitin ligase complex | |
| GO:0005634 | IBA | GOA Database | nucleus | |
| GO:0000151 | ISO | PLAZA Integrative Orthology | ubiquitin ligase complex | AT3G42830 |
| GO:0019005 | ISO | PLAZA Integrative Orthology | SCF ubiquitin ligase complex | AT5G20570 |
| GO:0031463 | ISO | PLAZA Integrative Orthology | Cul3-RING ubiquitin ligase complex | AT5G20570 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 19.2.2.3.4.1 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.RUB/NEDD8 conjugation (neddylation).RUB ligase E3 activities.RUB ligase E3 protein (RBX1) |
| 19.2.2.8.1.3 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.UBQ-E2-recruiting component RBX1 |