Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p12910 Brassica napus
A01p12920 Brassica napus
A07p34700 Brassica napus
A08p15090 Brassica napus
A08p33630 Brassica napus
A09p64510 Brassica napus
Aa31LG1G3640 Aethionema arabicum
Aa31LG6G3600 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1243 Anthoceros agrestis
Actinidia01924 Actinidia chinensis
Actinidia01925 Actinidia chinensis
Actinidia14901 Actinidia chinensis
Ah.09g235970 Amaranthus hybridus
Ah.14g089010 Amaranthus hybridus
Ah.14g089020 Amaranthus hybridus
Ah.14g089030 Amaranthus hybridus
AL1G22220 Arabidopsis lyrata
AL2G27120 Arabidopsis lyrata
AL7G32420 Arabidopsis lyrata
AL7G32430 Arabidopsis lyrata
Aqoxy1G02695 Aquilegia oxysepala
Aqoxy3G00270 Aquilegia oxysepala
Aqoxy6G01267 Aquilegia oxysepala
Aqoxy6G01268 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3Q5F2Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GJ31ZB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M5M2WQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M7E1WE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W7AU0P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZHA71P Arachis hypogaea
AT1G11190 Arabidopsis thaliana
AT1G68290 Arabidopsis thaliana
AT4G21585 Arabidopsis thaliana
AT4G21590 Arabidopsis thaliana
AT4G21600 Arabidopsis thaliana
ATR0693G406 Amborella trichopoda
ATR1125G039 Amborella trichopoda
Atru.chr10.1981 Acer truncatum
Atru.chr10.1982 Acer truncatum
Atru.chr11.117 Acer truncatum
AUR62014740 Chenopodium quinoa
AUR62014742 Chenopodium quinoa
AUR62016919 Chenopodium quinoa
AUR62016922 Chenopodium quinoa
BcaB02g06417 Brassica carinata
BcaB03g11688 Brassica carinata
BcaB03g13270 Brassica carinata
BcaB03g15101 Brassica carinata
BcaB03g15104 Brassica carinata
BcaB08g37383 Brassica carinata
BcaC01g00690 Brassica carinata
BcaC01g00691 Brassica carinata
BcaC07g38643 Brassica carinata
BcaC07g41793 Brassica carinata
BcaC08g46260 Brassica carinata
BcaNung02774 Brassica carinata
BcaNung02776 Brassica carinata
BcaNung02777 Brassica carinata
BolC1t01507H Brassica oleracea
BolC1t01508H Brassica oleracea
BolC3t20602H Brassica oleracea
BolC3t20603H Brassica oleracea
BolC3t20604H Brassica oleracea
BolC6t39255H Brassica oleracea
BolC8t49054H Brassica oleracea
BolC8t52370H Brassica oleracea
BraA01t01235Z Brassica rapa
BraA01t01236Z Brassica rapa
BraA07t31089Z Brassica rapa
BraA08t33489Z Brassica rapa
BraA08t35277Z Brassica rapa
BraA09t41800Z Brassica rapa
C01p15550 Brassica napus
C01p15560 Brassica napus
C03p83160 Brassica napus
C03p83210 Brassica napus
C03p83220 Brassica napus
C06p41710 Brassica napus
C08p14150 Brassica napus
C08p48310 Brassica napus
CAN.G1181.4 Capsicum annuum
CAN.G1181.5 Capsicum annuum
CAN.G610.73 Capsicum annuum
CANSAT01G0480 Cannabis sativa
CANSAT56G0127 Cannabis sativa
CANSAT56G1856 Cannabis sativa
CANSAT56G4440 Cannabis sativa
CARHR011420 Cardamine hirsuta
CARHR060970 Cardamine hirsuta
CARHR228280 Cardamine hirsuta
CARHR228290 Cardamine hirsuta
Carub.0001s1078 Capsella rubella
Carub.0002s1477 Capsella rubella
Carub.0007s1980 Capsella rubella
Carub.0007s1981 Capsella rubella
Carub.0007s1982 Capsella rubella
Ca_00273_v3 Cicer arietinum L.
Ca_02935_v3 Cicer arietinum L.
Ca_11161_v3 Cicer arietinum L.
Ca_18494_v3 Cicer arietinum L.
CBR_g37154 Chara braunii
Cc02_g12610 Coffea canephora
Cc02_g12620 Coffea canephora
Cc07_g08020 Coffea canephora
Cc07_g08980 Coffea canephora
Cc11_g10000 Coffea canephora
CDE05G0721 Ceratophyllum demersum
CDE12G0456 Ceratophyllum demersum
Cfa000370 Carpinus fangiana
Cfa018584 Carpinus fangiana
Ciclev10015663m.g Citrus clementina
Ciclev10016137m.g Citrus clementina
Ciclev10016145m.g Citrus clementina
Ciclev10016240m.g Citrus clementina
CiPaw.09G159400 Carya illinoinensis
CiPaw.10G119900 Carya illinoinensis
CiPaw.16G065700 Carya illinoinensis
ClCG01G022610 Citrullus lanatus
ClCG03G005590 Citrullus lanatus
ClCG05G022620 Citrullus lanatus
COL.COLO4_06018 Corchorus olitorius
COL.COLO4_31556 Corchorus olitorius
COL.COLO4_31557 Corchorus olitorius
Cpa.g.sc27.105 Carica papaya
Cpa.g.sc27.106 Carica papaya
CsaV3_1G011850 Cucumis sativus L.
CsaV3_1G014790 Cucumis sativus L.
CsaV3_5G034420 Cucumis sativus L.
CSS0005173 Camellia sinensis var. sinensis
CSS0024504 Camellia sinensis var. sinensis
CSS0036367 Camellia sinensis var. sinensis
DCAR_008956 Daucus carota
DCAR_023652 Daucus carota
DCAR_028125 Daucus carota
DCAR_028127 Daucus carota
DCAR_028128 Daucus carota
Dinv31628 Davidia involucrata
Dinv39798 Davidia involucrata
Dinv40510 Davidia involucrata
Duzib192G0202 Durio zibethinus
Duzib235G0226 Durio zibethinus
Duzib235G0868 Durio zibethinus
Duzib248G0784 Durio zibethinus
Duzib268G1768 Durio zibethinus
ECA234G1485 Erigeron canadensis
ECA248G1512 Erigeron canadensis
EL10Ac1g01687 Beta vulgaris
EL10Ac1g01688 Beta vulgaris
EL10Ac7g17796 Beta vulgaris
EL10Ac8g20628 Beta vulgaris
Eucgr.B03011 Eucalyptus grandis
Eucgr.D00695 Eucalyptus grandis
Eucgr.D00696 Eucalyptus grandis
FAN07G0327 Fragaria x ananassa
FAN11G1883 Fragaria x ananassa
FAN11G3359 Fragaria x ananassa
FAN12G1284 Fragaria x ananassa
FAN12G1921 Fragaria x ananassa
FAN16G1187 Fragaria x ananassa
FAN16G3525 Fragaria x ananassa
FAN17G0640 Fragaria x ananassa
FAN21G0134 Fragaria x ananassa
FAN21G1701 Fragaria x ananassa
FAN22G0277 Fragaria x ananassa
FAN25G2715 Fragaria x ananassa
FvH4_3g04350 Fragaria vesca
FvH4_3g04360 Fragaria vesca
FvH4_4g27190 Fragaria vesca
Glyma.01G083300 Glycine max
Glyma.07G050300 Glycine max
Glyma.07G191100 Glycine max
Glyma.08G058100 Glycine max
Glyma.13G245100 Glycine max
Glyma.15G068600 Glycine max
Glyma.16G019200 Glycine max
Glyma.20G116800 Glycine max
Gohir.A01G176200 Gossypium hirsutum
Gohir.A05G164300 Gossypium hirsutum
Gohir.A09G071100 Gossypium hirsutum
Gohir.A10G019500 Gossypium hirsutum
Gohir.A10G019700 Gossypium hirsutum
Gohir.D01G167000 Gossypium hirsutum
Gohir.D05G167200 Gossypium hirsutum
Gohir.D06G134250 Gossypium hirsutum
Gohir.D09G070900 Gossypium hirsutum
Gohir.D10G020300 Gossypium hirsutum
Gohir.D10G020500 Gossypium hirsutum
Gorai.002G207500 Gossypium raimondii
Gorai.006G085700 Gossypium raimondii
Gorai.009G172200 Gossypium raimondii
Gorai.011G021500 Gossypium raimondii
Gorai.011G021600 Gossypium raimondii
Gorai.013G213400 Gossypium raimondii
GSVIVG01005841001 Vitis vinifera
GSVIVG01005842001 Vitis vinifera
GSVIVG01011882001 Vitis vinifera
HanXRQChr11g0341621 Helianthus annuus
HanXRQChr16g0517971 Helianthus annuus
HanXRQChr17g0567581 Helianthus annuus
Haze_06553 Corylus avellana
Haze_17497 Corylus avellana
Hma1.2p1_0061F.1_g033740 Hydrangea macrophylla
Hma1.2p1_1363F.1_g278360 Hydrangea macrophylla
HPP92_000176 Vanilla planifolia
HPP92_004814 Vanilla planifolia
HPP92_004817 Vanilla planifolia
HPP92_021862 Vanilla planifolia
HPP92_026533 Vanilla planifolia
HPP92_026560 Vanilla planifolia
Hund21267 Selenicereus undatus
Hund21268 Selenicereus undatus
Hund25058 Selenicereus undatus
Lalb_Chr09g0327401 Lupinus albus
Lalb_Chr09g0327411 Lupinus albus
Lalb_Chr10g0100071 Lupinus albus
Lalb_Chr14g0370321 Lupinus albus
Lj1C1211T15 Lonicera japonica
Lj2g0016964 Lotus japonicus
Lj2g0023230 Lotus japonicus
Lj4g0027631 Lotus japonicus
Lj5g0020690 Lotus japonicus
Lj6A756T65 Lonicera japonica
Lj6g0014989 Lotus japonicus
Lsat_1_v5_gn_1_124800 Lactuca sativa
Lsat_1_v5_gn_2_62741 Lactuca sativa
Lsat_1_v5_gn_4_15881 Lactuca sativa
Lsat_1_v5_gn_4_56261 Lactuca sativa
Manes.06G066800 Manihot esculenta
Manes.16G022200 Manihot esculenta
Manes.17G040400 Manihot esculenta
Mapoly0023s0069 Marchantia polymorpha
Mapoly0115s0066 Marchantia polymorpha
Mapoly0115s0069 Marchantia polymorpha
MBI02_g10549_MAGBIO Magnolia biondii
MBI09_g16513_MAGBIO Magnolia biondii
MBI16_g32665_MAGBIO Magnolia biondii
MBI16_g34841_MAGBIO Magnolia biondii
MD05G1323600 Malus domestica
MD05G1323700 Malus domestica
MD05G1323800 Malus domestica
MD10G1079400 Malus domestica
MD10G1301500 Malus domestica
MD13G1040300 Malus domestica
MD16G1041200 Malus domestica
MD16G1041300 Malus domestica
Medtr1g110510 Medicago truncatula
Medtr2g012440 Medicago truncatula
Medtr4g090610 Medicago truncatula
Medtr5g056140 Medicago truncatula
Medtr5g056160 Medicago truncatula
Medtr5g056560 Medicago truncatula
MELO3C002562.2 Cucumis melo
MELO3C004715.2 Cucumis melo
MELO3C012257.2 Cucumis melo
Migut.B00997 Erythranthe guttata
Migut.C00041 Erythranthe guttata
Migut.E00352 Erythranthe guttata
Migut.E00353 Erythranthe guttata
Migut.E00354 Erythranthe guttata
Migut.L01055 Erythranthe guttata
Migut.M01195 Erythranthe guttata
Migut.M01196 Erythranthe guttata
MSTRG.7661 Avicennia marina
Nitab4.5_0000092g0250 Nicotiana tabacum
Nitab4.5_0001170g0250 Nicotiana tabacum
Nitab4.5_0003676g0070 Nicotiana tabacum
Nitab4.5_0003715g0100 Nicotiana tabacum
Nitab4.5_0014253g0010 Nicotiana tabacum
Nn036s41625 Nelumbo nucifera
Nn1g03937 Nelumbo nucifera
Nn1g06715 Nelumbo nucifera
Nn1g06716 Nelumbo nucifera
Nn4g23873 Nelumbo nucifera
Nn8g40271 Nelumbo nucifera
Oeu034231.1 Olea europaea
Oeu038222.1 Olea europaea
Oeu057721.1 Olea europaea
Os01g0128100 Oryza sativa ssp. japonica
Os01g0128200 Oryza sativa ssp. japonica
Os04g0636400 Oryza sativa ssp. japonica
Os04g0652700 Oryza sativa ssp. japonica
Peaxi162Scf00527g00026 Petunia axillaris
Peaxi162Scf00753g00440 Petunia axillaris
PGR004G1156 Punica granatum
PGR004G1293 Punica granatum
PGR102G2605 Punica granatum
PGSC0003DMG400014560 Solanum tuberosum
Phvul.002G223100 Phaseolus vulgaris
Phvul.003G030200 Phaseolus vulgaris
Phvul.003G030500 Phaseolus vulgaris
Phvul.006G190700 Phaseolus vulgaris
Phvul.007G028400 Phaseolus vulgaris
Potri.010G123500 Populus trichocarpa
Potri.011G044400 Populus trichocarpa
Potri.011G044500 Populus trichocarpa
Pp3c10_13680 Physcomitrium patens
Pp3c15_1100 Physcomitrium patens
Prupe.1G312700 Prunus persica
Prupe.4G038800 Prunus persica
Prupe.4G038900 Prunus persica
Psat1g143000 Pisum sativum
Psat1g207800 Pisum sativum
Psat2g081400 Pisum sativum
Psat2g102960 Pisum sativum
Psat4g144240 Pisum sativum
Psat5g079000 Pisum sativum
Psat5g254600 Pisum sativum
Psat5g284800 Pisum sativum
Psat6g224440 Pisum sativum
Psat6g224480 Pisum sativum
Psat6g226800 Pisum sativum
Psat6g226840 Pisum sativum
Psat6g227600 Pisum sativum
Psat7g109960 Pisum sativum
Psat7g182720 Pisum sativum
PSO017G2296 Papaver somniferum
PSO017G2887 Papaver somniferum
PSO541G0410 Papaver somniferum
PSO541G4032 Papaver somniferum
PSO675G1538 Papaver somniferum
PSO675G7087 Papaver somniferum
PSO675G8562 Papaver somniferum
QL01p041091 Quercus lobata
QL05p038629 Quercus lobata
QL05p041114 Quercus lobata
QL05p041123 Quercus lobata
RcHm_v2.0_Chr4g0434981 Rosa chinensis
RcHm_v2.0_Chr4g0434991 Rosa chinensis
RcHm_v2.0_Chr5g0006741 Rosa chinensis
RcHm_v2.0_Chr5g0006751 Rosa chinensis
Rhsim05G0153600 Rhododendron simsii
Rhsim05G0153800 Rhododendron simsii
Rhsim05G0153900 Rhododendron simsii
Rhsim05G0156700 Rhododendron simsii
Rhsim09G0106800 Rhododendron simsii
Rhsim13G0174700 Rhododendron simsii
Sabra10G0093500 Salix brachista
Sabra11G0031100 Salix brachista
SalBow8G3486 Salvia bowleyana
SalBow8G5115 Salvia bowleyana
SalBow8G5397 Salvia bowleyana
Sc05g0008000 Simmondsia chinensis
Sc05g0008010 Simmondsia chinensis
Sc17g0006480 Simmondsia chinensis
Sed0002956 Sechium edule
Sed0020573 Sechium edule
Sed0027474 Sechium edule
SEGI_01174 Sequoiadendron giganteum
SEGI_03583 Sequoiadendron giganteum
SEGI_08918 Sequoiadendron giganteum
SEGI_13484 Sequoiadendron giganteum
SEGI_17226 Sequoiadendron giganteum
SEGI_20154 Sequoiadendron giganteum
SEGI_20719 Sequoiadendron giganteum
SEGI_26184 Sequoiadendron giganteum
SEGI_26743 Sequoiadendron giganteum
SEGI_37438 Sequoiadendron giganteum
SEGI_37785 Sequoiadendron giganteum
SGA_v2.0_scaffold114G31967 Striga asiatica
SGA_v2.0_scaffold14G06880 Striga asiatica
SGA_v2.0_scaffold170G38775 Striga asiatica
SMO147G0031 Selaginella moellendorffii
SMO351G0457 Selaginella moellendorffii
Solyc02g078910.3 Solanum lycopersicum
Solyc02g078920.4 Solanum lycopersicum
Solyc05g009430.3 Solanum lycopersicum
Sopen02g023720 Solanum pennellii
Sopen02g023730 Solanum pennellii
Sopen05g005250 Solanum pennellii
Sp1g09860 Schrenkiella parvula
Sp5g23340 Schrenkiella parvula
Sp7g19730 Schrenkiella parvula
TAR371G0937 Trochodendron aralioides
TAR374G0133 Trochodendron aralioides
TAR374G0428 Trochodendron aralioides
TAR374G1212 Trochodendron aralioides
THA.LOC104809553 Tarenaya hassleriana
THA.LOC104812771 Tarenaya hassleriana
THA.LOC104815463 Tarenaya hassleriana
THA.LOC104819043 Tarenaya hassleriana
Thecc.02G226800 Theobroma cacao
Thecc.06G196500 Theobroma cacao
Thecc.06G196600 Theobroma cacao
Thhalv10008305m.g Eutrema salsugineum
Thhalv10018954m.g Eutrema salsugineum
Thhalv10025844m.g Eutrema salsugineum
Thhalv10025853m.g Eutrema salsugineum
Thhalv10025874m.g Eutrema salsugineum
TPR.G18818 Trifolium pratense
TPR.G32412 Trifolium pratense
TPR.G33176 Trifolium pratense
TPR.G36833 Trifolium pratense
TPR.G38082 Trifolium pratense
TPR.G38351 Trifolium pratense
TPR.G394 Trifolium pratense
TWI31G0232 Tripterygium wilfordii
TWI63G0131 Tripterygium wilfordii
TWI63G1314 Tripterygium wilfordii
TWI63G1666 Tripterygium wilfordii
unitig_699.g19517 Utricularia gibba
unitig_749.g13171 Utricularia gibba
vmacro10564 Vaccinium macrocarpon
vmacro10565 Vaccinium macrocarpon
vmacro22277 Vaccinium macrocarpon
VMungo0251G3214 Vigna mungo
VMungo0540G1042 Vigna mungo
VMungo0647G0793 Vigna mungo
VMungo0720G2863 Vigna mungo
VMungo1215G1722 Vigna mungo
VMungo1215G2203 Vigna mungo
Zm00001eb043930 Zea mays
Zm00001eb068120 Zea mays
Zm00001eb125480 Zea mays
Zm00001eb335070 Zea mays

User provided reference genes

Program Settings