Gene: PGSC0003DMG400014560

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400014560
  • Transcript Identifier PGSC0003DMT400037746
  • Gene Type Coding gene
  • Location ST4.03ch05 : 2761676-2764638 : negative

Gene Family Information

  • ID HOM05D001541
  • #Genes/#Species 414/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37445507
  • id PGSC0003DMG400014560.v4.03
  • uniprot M1B5U3

Descriptions

  • Description Bifunctional nuclease
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006259
ISO
PLAZA Integrative OrthologyDNA metabolic process AT4G21600
GO:0080187
ISO
PLAZA Integrative Orthologyfloral organ senescence AT1G11190
GO:0010150
ISO
PLAZA Integrative Orthologyleaf senescence AT1G11190
GO:0090305
ISO
PLAZA Integrative Orthologynucleic acid phosphodiester bond hydrolysis AT4G21600
GO:0090502
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, endonucleolytic
GO:0006308
IEA
GOA DatabaseDNA catabolic process
GO:0006308
IEA
InterProDNA catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004519
IBA
IEA
GOA Databaseendonuclease activity
GO:0004519
IEA
InterProendonuclease activity
GO:0016891
ISO
PLAZA Integrative Orthologyendoribonuclease activity, producing 5'-phosphomonoesters AT1G11190
GO:0008309
IEA
GOA Databasedouble-stranded DNA exodeoxyribonuclease activity
GO:0000014
IEA
GOA Databasesingle-stranded DNA endodeoxyribonuclease activity
GO:0004521
IEA
GOA Databaseendoribonuclease activity
GO:0043765
IEA
GOA DatabaseT/G mismatch-specific endonuclease activity
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0016788
IEA
GOA Databasehydrolase activity, acting on ester bonds
GO:0016788
IEA
InterProhydrolase activity, acting on ester bonds
GO:0004518
IEA
GOA Databasenuclease activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0046872
IEA
GOA Databasemetal ion binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003154 S1/P1 nuclease
IPR008947 Phospholipase C/P1 nuclease domain superfamily
Mapman id Description
50.3.1 Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase acting on ester bond