Gene: AT4G21600

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G21600
  • Transcript Identifier AT4G21600.1
  • Gene Type Coding gene
  • Location Chr4 : 11485319-11487235 : positive

Gene Family Information

  • ID HOM05D001541
  • #Genes/#Species 414/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G21600.1
  • symbol ENDO5
  • uniprot F4JJL3

Descriptions

  • Description endonuclease 5
  • Computational description endonuclease 5 (ENDO5); FUNCTIONS IN: T/G mismatch-specific endonuclease activity, single-stranded DNA specific endodeoxyribonuclease activity, endonuclease activity, nucleic acid binding; INVOLVED IN: DNA catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Phospholipase C/P1 nuclease, core (InterPro:IPR008947), S1/P1 nuclease (InterPro:IPR003154); BEST Arabidopsis thaliana protein match is: endonuclease 4 (TAIR:AT4G21585.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006308
IEA
Gene OntologyDNA catabolic process
GO:0006308
IEA
InterProDNA catabolic process
GO:0090502
IDA
Gene OntologyRNA phosphodiester bond hydrolysis, endonucleolytic1
GO:0090305
IDA
Gene Ontologynucleic acid phosphodiester bond hydrolysis2
GO:0006259
IDA
Gene OntologyDNA metabolic process2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004519
IEA
GOA Databaseendonuclease activity
GO:0004519
IDA
IBA
Gene Ontologyendonuclease activity1 3
GO:0004519
IEA
InterProendonuclease activity
GO:0003676
IEA
Gene Ontologynucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0016788
IEA
GOA Databasehydrolase activity, acting on ester bonds
GO:0016788
IEA
InterProhydrolase activity, acting on ester bonds
GO:0004518
IEA
GOA Databasenuclease activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0004521
IDA
Gene Ontologyendoribonuclease activity1
GO:0043765
IDA
Gene OntologyT/G mismatch-specific endonuclease activity2
GO:0000014
IDA
Gene Ontologysingle-stranded DNA endodeoxyribonuclease activity2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
ISM
Gene Ontologyextracellular region

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008947 Phospholipase C/P1 nuclease domain superfamily
IPR003154 S1/P1 nuclease
Mapman id Description
50.3.1 Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase acting on ester bond