Gene: Carub.0007s1981
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0007s1981
- Transcript Identifier Carub.0007s1981.1
- Gene Type Coding gene
- Location scaffold_7 : 7419712-7421729 : negative
Gene Family Information
- ID HOM05D001541
- #Genes/#Species 414/96
- Phylogenetic origin
- ID ORTHO05D001465
- #Genes/#Species 402/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0007s1981.v1.1
- pacid 39235499
- synonym Carubv10007633m.g
Descriptions
- Description 3.1.30.1 - Aspergillus nuclease S(1) / Single-stranded-nucleate endonuclease
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006308 | IEA | InterPro | DNA catabolic process | |
| GO:0090502 | ISO | PLAZA Integrative Orthology | RNA phosphodiester bond hydrolysis, endonucleolytic | AT4G21590 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016788 | IEA | InterPro | hydrolase activity, acting on ester bonds | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0004519 | IEA | InterPro | endonuclease activity | |
| GO:0043765 | ISO | PLAZA Integrative Orthology | T/G mismatch-specific endonuclease activity | AT4G21590 |
| GO:0000014 | ISO | PLAZA Integrative Orthology | single-stranded DNA endodeoxyribonuclease activity | AT4G21590 |
| GO:0004521 | ISO | PLAZA Integrative Orthology | endoribonuclease activity | AT4G21590 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 50.3.1 | Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase acting on ester bond |