Gene: Sopen02g023730

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g023730
  • Transcript Identifier Sopen02g023730.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 47154428-47163820 : negative

Gene Family Information

  • ID HOM05D001541
  • #Genes/#Species 414/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g023730.1

Descriptions

  • Description Encodes a putative endonuclease but no demonstrable endonuclease activity, either towards single stranded DNA or mismatches, has been seen in vitro. | endonuclease 4 (ENDO4) | FUNCTIONS IN: endonuclease activity, nucleic acid binding | INVOLVED IN: DNA catabolic process | LOCATED IN: endomembrane system | CONTAINS InterPro DOMAIN/s: Phospholipase C/P1 nuclease, core , S1/P1 nuclease | BEST Arabidopsis thaliana protein match is: endonuclease 5
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006308
IEA
InterProDNA catabolic process
GO:0090502
ISO
PLAZA Integrative OrthologyRNA phosphodiester bond hydrolysis, endonucleolytic AT4G21600
GO:0090305
ISO
PLAZA Integrative Orthologynucleic acid phosphodiester bond hydrolysis AT4G21600
GO:0006259
ISO
PLAZA Integrative OrthologyDNA metabolic process AT4G21600

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016788
IEA
InterProhydrolase activity, acting on ester bonds
GO:0003676
IEA
InterPronucleic acid binding
GO:0004519
IEA
InterProendonuclease activity
GO:0043765
ISO
PLAZA Integrative OrthologyT/G mismatch-specific endonuclease activity AT4G21600
GO:0000014
ISO
PLAZA Integrative Orthologysingle-stranded DNA endodeoxyribonuclease activity AT4G21600
GO:0004521
ISO
PLAZA Integrative Orthologyendoribonuclease activity AT4G21600

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008947 Phospholipase C/P1 nuclease domain superfamily
IPR003154 S1/P1 nuclease
Mapman id Description
50.3.1 Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase acting on ester bond