Gene: COL.COLO4_31557

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_31557
  • Transcript Identifier COL.rna30272
  • Gene Type Coding gene
  • Location AWUE01020860.1 : 150377-153515 : negative

Gene Family Information

  • ID HOM05D001541
  • #Genes/#Species 414/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna30272
  • GenBank OMO65081.1
  • id gene31529
  • gene_name COLO4_31557
  • uniprot A0A1R3H420

Descriptions

  • Description S1/P1 nuclease
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006259
ISO
PLAZA Integrative OrthologyDNA metabolic process AT4G21600
GO:0090502
ISO
PLAZA Integrative OrthologyRNA phosphodiester bond hydrolysis, endonucleolytic AT4G21600
GO:0006308
IEA
GOA DatabaseDNA catabolic process
GO:0006308
IEA
InterProDNA catabolic process
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0004521
ISO
PLAZA Integrative Orthologyendoribonuclease activity AT4G21600
GO:0000014
ISO
PLAZA Integrative Orthologysingle-stranded DNA endodeoxyribonuclease activity AT4G21600
GO:0043765
ISO
PLAZA Integrative OrthologyT/G mismatch-specific endonuclease activity AT4G21600
GO:0008309
ISO
PLAZA Integrative Orthologydouble-stranded DNA exodeoxyribonuclease activity AT1G68290
GO:0016788
IEA
GOA Databasehydrolase activity, acting on ester bonds
GO:0016788
IEA
InterProhydrolase activity, acting on ester bonds
GO:0004519
IEA
GOA Databaseendonuclease activity
GO:0004519
IEA
InterProendonuclease activity
GO:0004518
IEA
GOA Databasenuclease activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003154 S1/P1 nuclease
IPR008947 Phospholipase C/P1 nuclease domain superfamily
Mapman id Description
50.3.1 Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase acting on ester bond