Gene: AT1G11190

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G11190
  • Transcript Identifier AT1G11190.1
  • Gene Type Coding gene
  • Location Chr1 : 3750338-3752696 : negative

Gene Family Information

  • ID HOM05D001541
  • #Genes/#Species 414/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G11190.1
  • symbol BFN1
  • Alias ENDO1,ENDONUCLEASE 1
  • uniprot Q9SXA6

Descriptions

  • Description bifunctional nuclease i
  • Computational description bifunctional nuclease i (BFN1); FUNCTIONS IN: T/G mismatch-specific endonuclease activity, endoribonuclease activity, producing 5'-phosphomonoesters, single-stranded DNA specific endodeoxyribonuclease activity, nucleic acid binding; INVOLVED IN: DNA catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase C/P1 nuclease, core (InterPro:IPR008947), S1/P1 nuclease (InterPro:IPR003154); BEST Arabidopsis thaliana protein match is: endonuclease 4 (TAIR:AT4G21585.1); Has 701 Blast hits to 698 proteins in 200 species: Archae - 0; Bacteria - 187; Metazoa - 0; Fungi - 98; Plants - 121; Viruses - 4; Other Eukaryotes - 291 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090502
IDA
Gene OntologyRNA phosphodiester bond hydrolysis, endonucleolytic1
GO:0006308
IEA
Gene OntologyDNA catabolic process
GO:0006308
IEA
InterProDNA catabolic process
GO:0080187
IEP
Gene Ontologyfloral organ senescence2
GO:0010150
IEP
Gene Ontologyleaf senescence3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016788
IEA
GOA Databasehydrolase activity, acting on ester bonds
GO:0016788
IEA
InterProhydrolase activity, acting on ester bonds
GO:0004519
IEA
GOA Databaseendonuclease activity
GO:0004519
IDA
IBA
Gene Ontologyendonuclease activity1 4
GO:0004519
IEA
InterProendonuclease activity
GO:0003676
IEA
Gene Ontologynucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0004518
IEA
GOA Databasenuclease activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0008309
IDA
Gene Ontologydouble-stranded DNA exodeoxyribonuclease activity1
GO:0004521
IDA
Gene Ontologyendoribonuclease activity1
GO:0043765
IDA
Gene OntologyT/G mismatch-specific endonuclease activity5
GO:0016891
IDA
Gene Ontologyendoribonuclease activity, producing 5'-phosphomonoesters3
GO:0000014
IDA
Gene Ontologysingle-stranded DNA endodeoxyribonuclease activity3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
ISM
Gene Ontologyextracellular region

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003154 S1/P1 nuclease
IPR008947 Phospholipase C/P1 nuclease domain superfamily
Mapman id Description
50.3.1 Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase acting on ester bond