Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro22130 Vaccinium macrocarpon HOM05D003161 ORTHO05D037274 8.9e-78 293.5 145 100.0
vmacro22127 Vaccinium macrocarpon HOM05D003161 ORTHO05D005173 1.4e-59 233.0 123 95.1
Rhsim04G0093500 Rhododendron simsii HOM05D003161 ORTHO05D005173 3.0e-57 225.3 123 91.1
CSS0010787 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 8.6e-57 223.8 123 89.4
Actinidia38605 Actinidia chinensis HOM05D003161 ORTHO05D005173 2.5e-56 222.2 123 90.2
GSVIVG01033430001 Vitis vinifera HOM05D003161 ORTHO05D005173 4.3e-56 221.5 122 90.2
Nitab4.5_0001364g0070 Nicotiana tabacum HOM05D003161 ORTHO05D005173 2.8e-55 218.8 123 88.6
Solyc03g051900.4 Solanum lycopersicum HOM05D003161 ORTHO05D005173 1.4e-54 216.5 123 87.0
Sopen03g011350 Solanum pennellii HOM05D003161 ORTHO05D005173 1.4e-54 216.5 123 87.0
CAN.G479.45 Capsicum annuum HOM05D003161 ORTHO05D005173 3.1e-54 215.3 123 86.2
Dinv25021 Davidia involucrata HOM05D003161 ORTHO05D005173 5.2e-54 214.5 123 86.2
HanXRQChr14g0457761 Helianthus annuus HOM05D003161 ORTHO05D005173 5.2e-54 214.5 123 86.2
ECA238G1915 Erigeron canadensis HOM05D003161 ORTHO05D005173 1.5e-53 213.0 123 86.2
Oeu046733.1 Olea europaea HOM05D003161 ORTHO05D005173 3.4e-53 211.8 122 86.1
Lsat_1_v5_gn_2_58000 Lactuca sativa HOM05D003161 ORTHO05D005173 4.4e-53 211.5 123 83.7
Cc06_g23250 Coffea canephora HOM05D003161 ORTHO05D005173 9.9e-53 210.3 122 86.9
Eucgr.A02507 Eucalyptus grandis HOM05D003161 ORTHO05D005173 1.3e-52 209.9 122 86.1
Manes.09G040300 Manihot esculenta HOM05D003161 ORTHO05D005173 1.3e-52 209.9 122 83.6
COL.COLO4_29434 Corchorus olitorius HOM05D003161 ORTHO05D005173 1.7e-52 209.5 122 84.4
DCAR_016871 Daucus carota HOM05D003161 ORTHO05D005173 1.7e-52 209.5 123 86.2
SalBow1G2678 Salvia bowleyana HOM05D003161 ORTHO05D005173 2.2e-52 209.1 123 84.6
Duzib128G1871 Durio zibethinus HOM05D003161 ORTHO05D005173 2.9e-52 208.8 136 75.7
Sabra16G0064500 Salix brachista HOM05D003161 ORTHO05D005173 2.9e-52 208.8 122 84.4
Thecc.05G180200 Theobroma cacao HOM05D003161 ORTHO05D005173 3.8e-52 208.4 122 83.6
MSTRG.26730 Avicennia marina HOM05D003161 ORTHO05D005173 6.4e-52 207.6 123 84.6
Gohir.D09G126300 Gossypium hirsutum HOM05D003161 ORTHO05D005173 8.4e-52 207.2 122 84.4
Gorai.006G145100 Gossypium raimondii HOM05D003161 ORTHO05D005173 8.4e-52 207.2 122 84.4
Potri.016G062600 Populus trichocarpa HOM05D003161 ORTHO05D005173 8.4e-52 207.2 122 83.6
Prupe.7G085700 Prunus persica HOM05D003161 ORTHO05D005173 1.1e-51 206.8 122 82.0
Migut.K00013 Erythranthe guttata HOM05D003161 ORTHO05D005173 1.4e-51 206.5 123 82.9
Hund19220 Selenicereus undatus HOM05D003161 ORTHO05D005173 1.9e-51 206.1 122 82.8
Carub.0003s1130 Capsella rubella HOM05D003161 ORTHO05D005173 2.4e-51 205.7 122 81.1
TWI53G1521 Tripterygium wilfordii HOM05D003161 ORTHO05D005173 2.4e-51 205.7 122 82.0
QL07p025506 Quercus lobata HOM05D003161 ORTHO05D005173 3.2e-51 205.3 139 72.7
RcHm_v2.0_Chr3g0478661 Rosa chinensis HOM05D003161 ORTHO05D005173 3.2e-51 205.3 122 82.8
Sp3g10190 Schrenkiella parvula HOM05D003161 ORTHO05D005173 3.2e-51 205.3 122 82.0
FvH4_6g21470 Fragaria vesca HOM05D003161 ORTHO05D005173 4.1e-51 204.9 122 82.0
FAN05G0820 Fragaria x ananassa HOM05D003161 ORTHO05D005173 4.1e-51 204.9 122 82.0
PGR004G2129 Punica granatum HOM05D003161 ORTHO05D005173 4.1e-51 204.9 122 81.1
AL3G23570 Arabidopsis lyrata HOM05D003161 ORTHO05D005173 5.4e-51 204.5 122 81.1
AT3G11964 Arabidopsis thaliana HOM05D003161 ORTHO05D005173 5.4e-51 204.5 122 82.0
Gohir.A09G130300 Gossypium hirsutum HOM05D003161 ORTHO05D005173 5.4e-51 204.5 122 83.6
CSS0043330 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 7.1e-51 204.1 134 79.1
Thhalv10019877m.g Eutrema salsugineum HOM05D003161 ORTHO05D005173 1.6e-50 203.0 122 80.3
Aqoxy2G02393 Aquilegia oxysepala HOM05D003161 ORTHO05D005173 2.7e-50 202.2 122 82.0
Hund19218 Selenicereus undatus HOM05D003161 ORTHO05D005173 2.7e-50 202.2 122 82.0
THA.LOC104826779 Tarenaya hassleriana HOM05D003161 ORTHO05D005173 2.7e-50 202.2 123 78.9
Aa31sc238G10 Aethionema arabicum HOM05D003161 ORTHO05D005173 3.5e-50 201.8 122 80.3
Sc19g0006250 Simmondsia chinensis HOM05D003161 ORTHO05D005173 6.0e-50 201.1 122 82.8
TPR.G14502 Trifolium pratense HOM05D003161 ORTHO05D005173 6.0e-50 201.1 122 81.1
Glyma.02G168900 Glycine max HOM05D003161 ORTHO05D005173 7.8e-50 200.7 122 82.0
Glyma.09G104000 Glycine max HOM05D003161 ORTHO05D005173 7.8e-50 200.7 122 82.0
FAN09G2861 Fragaria x ananassa HOM05D003161 ORTHO05D005173 1.0e-49 200.3 114 85.1
A05p37390 Brassica napus HOM05D003161 ORTHO05D005173 1.3e-49 199.9 122 79.5
BraA05t22538Z Brassica rapa HOM05D003161 ORTHO05D005173 1.3e-49 199.9 122 79.5
Atru.chr8.1220 Acer truncatum HOM05D003161 ORTHO05D005173 1.7e-49 199.5 122 82.0
CARHR086520 Cardamine hirsuta HOM05D003161 ORTHO05D005173 1.7e-49 199.5 122 78.7
TAR633G1132 Trochodendron aralioides HOM05D003161 ORTHO05D005173 2.3e-49 199.1 122 80.3
Ah.15g091410 Amaranthus hybridus HOM05D003161 ORTHO05D005173 3.0e-49 198.7 122 78.7
Ciclev10013867m.g Citrus clementina HOM05D003161 ORTHO05D005173 3.0e-49 198.7 122 82.0
BcaC05g29306 Brassica carinata HOM05D003161 ORTHO05D005173 3.9e-49 198.4 122 78.7
C05p55950 Brassica napus HOM05D003161 ORTHO05D005173 3.9e-49 198.4 122 78.7
BolC5t34262H Brassica oleracea HOM05D003161 ORTHO05D005173 3.9e-49 198.4 122 78.7
MELO3C008994.2 Cucumis melo HOM05D003161 ORTHO05D005173 3.9e-49 198.4 122 78.7
CsaV3_4G031200 Cucumis sativus L. HOM05D003161 ORTHO05D005173 3.9e-49 198.4 122 78.7
Sed0016761 Sechium edule HOM05D003161 ORTHO05D005173 3.9e-49 198.4 122 77.9
BcaB04g21101 Brassica carinata HOM05D003161 ORTHO05D005173 5.1e-49 198.0 122 79.5
CiPaw.08G134900 Carya illinoinensis HOM05D003161 ORTHO05D005173 5.1e-49 198.0 122 78.7
SGA_v2.0_scaffold274G46506 Striga asiatica HOM05D003161 ORTHO05D005173 5.1e-49 198.0 123 81.3
VMungo0720G1738 Vigna mungo HOM05D003161 ORTHO05D005173 5.1e-49 198.0 122 81.1
BcaC09g48184 Brassica carinata HOM05D003161 ORTHO05D005173 8.7e-49 197.2 122 79.5
BolC1t05277H Brassica oleracea HOM05D003161 ORTHO05D005173 8.7e-49 197.2 122 79.5
Ca_25942_v3 Cicer arietinum L. HOM05D003161 ORTHO05D005173 8.7e-49 197.2 122 80.3
Psat6g109960 Pisum sativum HOM05D003161 ORTHO05D005173 8.7e-49 197.2 122 79.5
ATR0737G016 Amborella trichopoda HOM05D003161 ORTHO05D005173 1.1e-48 196.8 122 77.0
Lj5g0006535 Lotus japonicus HOM05D003161 ORTHO05D005173 1.1e-48 196.8 122 79.5
Medtr1g054710 Medicago truncatula HOM05D003161 ORTHO05D005173 1.1e-48 196.8 122 79.5
CANSAT64G2741 Cannabis sativa HOM05D003161 ORTHO05D005173 1.5e-48 196.4 121 79.3
AUR62026957 Chenopodium quinoa HOM05D003161 ORTHO05D005173 1.5e-48 196.4 122 80.3
Phvul.007G270000 Phaseolus vulgaris HOM05D003161 ORTHO05D005173 1.5e-48 196.4 122 80.3
BraA01t04149Z Brassica rapa HOM05D003161 ORTHO05D005173 2.5e-48 195.7 122 78.7
Cfa020115 Carpinus fangiana HOM05D003161 ORTHO05D005173 4.3e-48 194.9 133 70.7
Haze_20072 Corylus avellana HOM05D003161 ORTHO05D005173 4.3e-48 194.9 133 70.7
MD12G1051100 Malus domestica HOM05D003161 ORTHO05D005173 4.3e-48 194.9 122 77.9
AUR62041562 Chenopodium quinoa HOM05D003161 ORTHO05D005173 1.6e-47 193.0 122 78.7
HPP92_027317 Vanilla planifolia HOM05D003161 ORTHO05D005173 2.8e-47 192.2 151 62.9
FAN05G2723 Fragaria x ananassa HOM05D003161 ORTHO05D005173 1.8e-46 189.5 108 86.1
FAN14G4107 Fragaria x ananassa HOM05D003161 ORTHO05D005173 1.8e-46 189.5 108 86.1
Lalb_Chr21g0316111 Lupinus albus HOM05D003161 ORTHO05D005173 9.0e-46 187.2 123 74.8
HPP92_015879 Vanilla planifolia HOM05D003161 ORTHO05D005173 2.0e-45 186.0 122 71.3
PSO384G1659 Papaver somniferum HOM05D003161 ORTHO05D005173 5.8e-45 184.5 123 74.8
PSO339G0479 Papaver somniferum HOM05D003161 ORTHO05D005173 1.7e-44 183.0 123 74.0
CDE02G0114 Ceratophyllum demersum HOM05D003161 ORTHO05D005173 3.8e-44 181.8 122 72.1
Zm00001eb302830 Zea mays HOM05D003161 ORTHO05D005173 6.4e-44 181.0 123 73.2
arahy.Tifrunner.gnm1.ann1.PL5CUR Arachis hypogaea HOM05D003161 ORTHO05D005173 8.4e-44 180.6 122 75.4
arahy.Tifrunner.gnm1.ann1.S31791 Arachis hypogaea HOM05D003161 ORTHO05D005173 8.4e-44 180.6 122 75.4
Cpa.g.sc85.20 Carica papaya HOM05D003161 ORTHO05D005173 1.6e-42 176.4 109 83.5
SEGI_22431 Sequoiadendron giganteum HOM05D003161 ORTHO05D005173 1.6e-42 176.4 122 68.0
Lj2C361G9 Lonicera japonica HOM05D003161 ORTHO05D005173 1.4e-35 153.3 123 68.3
unitig_744.g24086 Utricularia gibba HOM05D003161 ORTHO05D005173 6.0e-34 147.9 122 61.5
Mapoly0019s0051 Marchantia polymorpha HOM05D003161 ORTHO05D005173 2.1e-31 139.4 132 52.3
EL10Ac7g16694 Beta vulgaris HOM05D003161 ORTHO05D005173 2.4e-30 136.0 122 60.7
FAN02G0008 Fragaria x ananassa HOM05D003161 ORTHO05D005173 1.5e-29 133.3 76 84.2
Pp3c4_30330 Physcomitrium patens HOM05D003161 ORTHO05D005173 4.5e-29 131.7 131 51.9
AagrBONN_evm.TU.Sc2ySwM_340.243 Anthoceros agrestis HOM05D003161 ORTHO05D005173 1.3e-23 113.6 133 44.4
SMO137G0021 Selaginella moellendorffii HOM05D003161 ORTHO05D005173 3.4e-21 105.5 119 46.2
CBR_g22381 Chara braunii HOM05D003161 ORTHO05D005173 7.6e-21 104.4 131 38.2
Peaxi162Scf00045g00223 Petunia axillaris HOM05D003161 ORTHO05D005173 2.2e-20 102.8 62 79.0
Aa31LG3G5540 Aethionema arabicum HOM05D003161 ORTHO05D005173 3.8e-20 102.1 61 80.3
MD14G1050300 Malus domestica HOM05D003161 ORTHO05D005173 4.2e-19 98.6 89 61.8
PSO384G3517 Papaver somniferum HOM05D003161 ORTHO05D005173 1.0e-17 94.0 78 61.5
PSO170G5032 Papaver somniferum HOM05D003161 ORTHO05D037274 1.6e-15 86.7 109 45.9
PSO729G0038 Papaver somniferum HOM05D003161 ORTHO05D037274 2.1e-10 69.7 49 71.4
Nitab4.5_0000571g0110 Nicotiana tabacum HOM05D003161 ORTHO05D005173 2.8e-07 59.3 36 75.0
CAN.G1433.27 Capsicum annuum HOM05D003161 ORTHO05D005173 3.7e-07 58.9 58 55.2


User provided reference genes

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