Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13984 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 0.0e+00 1379.0 692 100.0
Rhsim07G0086500 Rhododendron simsii HOM05D006139 ORTHO05D007681 5.1e-272 941.0 807 66.5
CSS0045945 Camellia sinensis var. sinensis HOM05D006139 ORTHO05D007681 2.0e-252 875.9 740 64.5
Hma1.2p1_0412F.1_g147150 Hydrangea macrophylla HOM05D006139 ORTHO05D007681 1.2e-241 840.1 744 62.6
Lj4A728T41 Lonicera japonica HOM05D006139 ORTHO05D007681 4.8e-238 828.2 674 65.3
Potri.011G107400 Populus trichocarpa HOM05D006139 ORTHO05D007681 9.3e-234 813.9 740 60.1
GSVIVG01031668001 Vitis vinifera HOM05D006139 ORTHO05D007681 1.8e-229 799.7 738 60.4
QL10p044141 Quercus lobata HOM05D006139 ORTHO05D007681 9.0e-229 797.3 774 57.4
Sabra11G0095200 Salix brachista HOM05D006139 ORTHO05D007681 2.5e-226 789.3 748 58.2
Manes.03G099000 Manihot esculenta HOM05D006139 ORTHO05D007681 2.7e-225 785.8 740 58.2
Ciclev10019318m.g Citrus clementina HOM05D006139 ORTHO05D007681 4.6e-225 785.0 740 58.8
Prupe.1G178000 Prunus persica HOM05D006139 ORTHO05D007681 5.1e-224 781.6 740 57.4
Aqoxy2G03950 Aquilegia oxysepala HOM05D006139 ORTHO05D007681 7.4e-223 777.7 740 57.2
Sopen09g036170 Solanum pennellii HOM05D006139 ORTHO05D007681 2.8e-222 775.8 740 58.4
CsaV3_4G003770 Cucumis sativus L. HOM05D006139 ORTHO05D007681 2.6e-220 769.2 740 58.0
Solyc09g098230.3 Solanum lycopersicum HOM05D006139 ORTHO05D007681 3.4e-220 768.8 740 58.1
TAR365G1167 Trochodendron aralioides HOM05D006139 ORTHO05D007681 7.7e-220 767.7 722 58.7
Cc03_g10570 Coffea canephora HOM05D006139 ORTHO05D007681 1.3e-219 766.9 740 56.6
MELO3C017678.2 Cucumis melo HOM05D006139 ORTHO05D007681 1.7e-219 766.5 740 57.8
Migut.N00440 Erythranthe guttata HOM05D006139 ORTHO05D007681 1.7e-219 766.5 740 57.8
Sc22g0003230 Simmondsia chinensis HOM05D006139 ORTHO05D007681 3.2e-218 762.3 739 57.6
TWI38G2388 Tripterygium wilfordii HOM05D006139 ORTHO05D007681 3.2e-218 762.3 740 56.6
Eucgr.F03241 Eucalyptus grandis HOM05D006139 ORTHO05D007681 5.5e-218 761.5 748 56.0
MD13G1278700 Malus domestica HOM05D006139 ORTHO05D007681 1.6e-217 760.0 740 56.5
RcHm_v2.0_Chr4g0409801 Rosa chinensis HOM05D006139 ORTHO05D007681 6.1e-217 758.1 740 56.9
Sed0017452 Sechium edule HOM05D006139 ORTHO05D007681 1.4e-216 756.9 740 56.5
Thecc.07G123700 Theobroma cacao HOM05D006139 ORTHO05D007681 6.7e-216 754.6 740 55.9
ECA246G3778 Erigeron canadensis HOM05D006139 ORTHO05D007681 1.1e-215 753.8 741 56.3
CANSAT11G1108 Cannabis sativa HOM05D006139 ORTHO05D007681 2.0e-215 753.1 740 56.4
CiPaw.01G108300 Carya illinoinensis HOM05D006139 ORTHO05D007681 3.3e-215 752.3 740 56.2
Haze_11079 Corylus avellana HOM05D006139 ORTHO05D007681 4.3e-215 751.9 693 60.2
Duzib213G0841 Durio zibethinus HOM05D006139 ORTHO05D007681 9.7e-215 750.7 740 56.1
Nn3g20967 Nelumbo nucifera HOM05D006139 ORTHO05D007681 1.3e-214 750.4 692 59.5
SGA_v2.0_scaffold109G31142 Striga asiatica HOM05D006139 ORTHO05D007681 6.3e-214 748.0 743 55.6
Lsat_1_v5_gn_3_24941 Lactuca sativa HOM05D006139 ORTHO05D007681 5.3e-213 745.0 745 56.4
PSO017G2886 Papaver somniferum HOM05D006139 ORTHO05D007681 3.4e-212 742.3 739 54.7
PSO675G6876 Papaver somniferum HOM05D006139 ORTHO05D007681 3.4e-212 742.3 739 54.8
MSTRG.17865 Avicennia marina HOM05D006139 ORTHO05D007681 3.2e-210 735.7 740 55.5
Lalb_Chr06g0164661 Lupinus albus HOM05D006139 ORTHO05D007681 4.7e-209 731.9 742 54.3
FvH4_4g12150 Fragaria vesca HOM05D006139 ORTHO05D007681 3.9e-208 728.8 740 54.7
FAN12G2778 Fragaria x ananassa HOM05D006139 ORTHO05D007681 3.9e-208 728.8 740 54.7
Gohir.A01G052100 Gossypium hirsutum HOM05D006139 ORTHO05D007681 3.1e-205 719.2 740 54.6
Glyma.20G248800 Glycine max HOM05D006139 ORTHO05D007681 5.3e-205 718.4 747 54.4
Gorai.002G052100 Gossypium raimondii HOM05D006139 ORTHO05D007681 3.5e-204 715.7 740 54.2
arahy.Tifrunner.gnm1.ann1.46LBLY Arachis hypogaea HOM05D006139 ORTHO05D007681 4.5e-204 715.3 741 53.3
Hund19684 Selenicereus undatus HOM05D006139 ORTHO05D007681 2.5e-202 709.5 748 54.8
PGR031G2404 Punica granatum HOM05D006139 ORTHO05D007681 1.5e-199 700.3 741 52.2
VMungo0720G1636 Vigna mungo HOM05D006139 ORTHO05D007681 2.0e-199 699.9 742 52.4
Sp1g15110 Schrenkiella parvula HOM05D006139 ORTHO05D007681 7.5e-199 698.0 740 52.7
AT1G16970 Arabidopsis thaliana HOM05D006139 ORTHO05D007681 1.7e-198 696.8 741 52.9
Psat6g243280 Pisum sativum HOM05D006139 ORTHO05D007681 8.2e-198 694.5 741 53.0
Lj5g0023092 Lotus japonicus HOM05D006139 ORTHO05D007681 1.1e-197 694.1 740 53.0
Peaxi162Scf00286g00443 Petunia axillaris HOM05D006139 ORTHO05D007681 4.1e-197 692.2 692 57.2
Thhalv10007085m.g Eutrema salsugineum HOM05D006139 ORTHO05D007681 5.3e-197 691.8 740 52.3
Carub.0001s1670 Capsella rubella HOM05D006139 ORTHO05D007681 4.5e-196 688.7 739 52.2
Medtr1g116980 Medicago truncatula HOM05D006139 ORTHO05D007681 1.0e-195 687.6 738 52.3
C05p15280 Brassica napus HOM05D006139 ORTHO05D007681 1.5e-194 683.7 740 52.2
BcaC05g25552 Brassica carinata HOM05D006139 ORTHO05D007681 1.9e-194 683.3 740 52.0
A06p12870 Brassica napus HOM05D006139 ORTHO05D007681 5.5e-194 681.8 740 52.0
CARHR017480 Cardamine hirsuta HOM05D006139 ORTHO05D007681 1.2e-193 680.6 741 52.5
BcaB02g06659 Brassica carinata HOM05D006139 ORTHO05D007681 1.0e-192 677.6 740 51.8
THA.LOC104812308 Tarenaya hassleriana HOM05D006139 ORTHO05D007681 1.0e-192 677.6 739 52.1
Phvul.007G001600 Phaseolus vulgaris HOM05D006139 ORTHO05D007681 1.8e-192 676.8 738 52.0
ClCG07G016640 Citrullus lanatus HOM05D006139 ORTHO05D007681 2.3e-192 676.4 712 55.8
Zm00001eb116810 Zea mays HOM05D006139 ORTHO05D007681 7.5e-191 671.4 743 50.3
MBI07_g00628_MAGBIO Magnolia biondii HOM05D006139 ORTHO05D007681 3.7e-190 669.1 719 53.3
Gohir.D01G041500 Gossypium hirsutum HOM05D006139 ORTHO05D007681 1.4e-189 667.2 701 53.8
COL.COLO4_17513 Corchorus olitorius HOM05D006139 ORTHO05D007681 4.1e-189 665.6 738 51.9
AUR62003718 Chenopodium quinoa HOM05D006139 ORTHO05D007681 2.7e-185 652.9 653 56.2
ATR0609G005 Amborella trichopoda HOM05D006139 ORTHO05D007681 4.7e-185 652.1 740 49.9
FAN07G2792 Fragaria x ananassa HOM05D006139 ORTHO05D007681 8.0e-185 651.4 751 49.9
FAN12G0395 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.4e-184 650.6 752 50.4
Nitab4.5_0001687g0050 Nicotiana tabacum HOM05D006139 ORTHO05D007681 4.0e-184 649.0 681 54.5
FAN17G0552 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.2e-183 647.5 740 50.4
BolC5t30234H Brassica oleracea HOM05D006139 ORTHO05D007681 4.4e-183 645.6 740 50.5
BraA06t24447Z Brassica rapa HOM05D006139 ORTHO05D007681 3.7e-182 642.5 741 50.6
AUR62018029 Chenopodium quinoa HOM05D006139 ORTHO05D007681 3.1e-181 639.4 761 49.4
Dinv44237 Davidia involucrata HOM05D006139 ORTHO05D007681 7.0e-181 638.3 605 59.2
Nitab4.5_0001526g0130 Nicotiana tabacum HOM05D006139 ORTHO05D007681 2.7e-180 636.3 729 51.0
CAN.G710.40 Capsicum annuum HOM05D006139 ORTHO05D007681 1.0e-179 634.4 752 50.9
arahy.Tifrunner.gnm1.ann1.JAL8JD Arachis hypogaea HOM05D006139 ORTHO05D007681 6.1e-177 625.2 741 49.3
Mapoly0113s0020 Marchantia polymorpha HOM05D006139 ORTHO05D007681 6.6e-139 498.8 695 41.7
Oeu013397.2 Olea europaea HOM05D006139 ORTHO05D007681 1.4e-136 491.1 403 65.8
CDE02G2779 Ceratophyllum demersum HOM05D006139 ORTHO05D007681 1.5e-130 471.1 531 50.1
SMO361G0513 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 1.2e-127 461.5 682 41.1
SMO361G0769 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 2.9e-126 456.8 682 40.6
HPP92_015930 Vanilla planifolia HOM05D006139 ORTHO05D007681 6.4e-126 455.7 550 48.2
Cpa.g.sc77.50 Carica papaya HOM05D006139 ORTHO05D007681 1.1e-125 454.9 644 44.6
Atru.chr2.2053 Acer truncatum HOM05D006139 ORTHO05D007681 5.1e-123 446.0 420 57.4
AagrBONN_evm.TU.Sc2ySwM_228.1556 Anthoceros agrestis HOM05D006139 ORTHO05D007681 5.7e-114 416.0 744 37.2
PGSC0003DMG400014069 Solanum tuberosum HOM05D006139 ORTHO05D007681 2.8e-113 413.7 403 57.3
CBR_g19434 Chara braunii HOM05D006139 ORTHO05D007681 4.8e-105 386.3 694 35.6
TPR.G8879 Trifolium pratense HOM05D006139 ORTHO05D007681 2.4e-104 384.0 432 50.7
Pp3c18_7140 Physcomitrium patens HOM05D006139 ORTHO05D007681 1.8e-99 367.9 690 35.5
Atru.chr2.2052 Acer truncatum HOM05D006139 ORTHO05D007681 9.1e-96 355.5 248 73.8
SHI27652 Sapria himalayana HOM05D006139 ORTHO05D007681 2.0e-95 354.4 359 56.0
Aa31LG7G1410 Aethionema arabicum HOM05D006139 ORTHO05D007681 2.0e-90 337.8 713 36.3
DCAR_005495 Daucus carota HOM05D006139 ORTHO05D007681 2.2e-89 334.3 219 77.2
TPR.G8907 Trifolium pratense HOM05D006139 ORTHO05D007681 3.8e-86 323.6 270 61.9
DCAR_005496 Daucus carota HOM05D006139 ORTHO05D007681 8.5e-86 322.4 252 65.9
TPR.G8868 Trifolium pratense HOM05D006139 ORTHO05D007681 9.4e-85 318.9 290 58.3
unitig_578.g15953 Utricularia gibba HOM05D006139 ORTHO05D007681 1.9e-77 294.7 221 67.4
Ca_11423_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 1.2e-76 292.0 248 61.7
SEGI_35314 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 2.2e-65 254.6 272 52.2
Ah.03g143030 Amaranthus hybridus HOM05D006139 ORTHO05D007681 1.1e-61 242.3 187 66.8
Os07g0184900 Oryza sativa ssp. japonica HOM05D006139 ORTHO05D007681 6.8e-59 233.0 156 71.8
FAN22G0061 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.4e-56 225.3 164 70.1
unitig_578.g15954 Utricularia gibba HOM05D006139 ORTHO05D004041 1.4e-51 208.8 171 61.4
Ca_11425_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 2.6e-50 204.5 135 76.3
arahy.Tifrunner.gnm1.ann1.6RHH59 Arachis hypogaea HOM05D006139 ORTHO05D007681 2.5e-45 188.0 135 68.9
Hund20183 Selenicereus undatus HOM05D006139 ORTHO05D007681 8.9e-43 179.5 186 56.5
CANSAT78G0600 Cannabis sativa HOM05D006139 ORTHO05D007681 1.1e-37 162.5 118 66.9
Cre13.g607500 Chlamydomonas reinhardtii HOM05D006139 ORTHO05D007681 3.5e-31 141.0 784 24.4
AUR62043732 Chenopodium quinoa HOM05D006139 ORTHO05D007681 9.3e-24 116.3 84 64.3
Cfa021664 Carpinus fangiana HOM05D006139 ORTHO05D007681 7.8e-23 113.2 711 22.8
SEGI_31905 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 2.3e-22 111.7 74 66.2
Ca_11424_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 3.9e-22 110.9 124 48.4
vmacro12608 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 2.0e-18 98.6 65 83.1
CARHR154100 Cardamine hirsuta HOM05D006139 ORTHO05D007681 9.9e-18 96.3 66 71.2
BolC4t22161H Brassica oleracea HOM05D006139 ORTHO05D007681 3.8e-17 94.4 125 48.0
Potri.006G132501 Populus trichocarpa HOM05D006139 ORTHO05D007681 2.7e-15 88.2 78 59.0
HanXRQChr13g0406711 Helianthus annuus HOM05D006139 ORTHO05D007681 3.9e-14 84.3 51 72.5
Ah.03g143010 Amaranthus hybridus HOM05D006139 ORTHO05D007681 1.1e-11 76.3 101 44.6
Dinv25612 Davidia involucrata HOM05D000447 ORTHO05D007681 3.1e-11 74.7 79 51.9
MCO14G338 Micromonas commoda HOM05D006139 ORTHO05D007681 2.0e-10 72.0 223 29.1
Zm00001eb114470 Zea mays HOM05D006139 ORTHO05D007681 1.9e-08 65.5 36 80.6


User provided reference genes

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