Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12745 Vaccinium macrocarpon HOM05D002182 ORTHO05D004671 6.6e-190 667.2 323 100.0
Rhsim10G0124100 Rhododendron simsii HOM05D002182 ORTHO05D004671 7.6e-130 467.6 270 86.7
Actinidia20028 Actinidia chinensis HOM05D002182 ORTHO05D004671 8.2e-124 447.6 325 70.2
Dinv35485 Davidia involucrata HOM05D002182 ORTHO05D004671 1.9e-120 436.4 327 68.5
CSS0041549 Camellia sinensis var. sinensis HOM05D002182 ORTHO05D004671 8.8e-110 401.0 323 65.6
GSVIVG01026461001 Vitis vinifera HOM05D002182 ORTHO05D004671 7.0e-107 391.3 330 60.0
Lalb_Chr11g0068591 Lupinus albus HOM05D002182 ORTHO05D004671 1.2e-106 390.6 331 62.2
CiPaw.04G079900 Carya illinoinensis HOM05D002182 ORTHO05D004671 1.3e-105 387.1 330 60.9
Cfa002178 Carpinus fangiana HOM05D002182 ORTHO05D004671 2.9e-105 386.0 331 61.3
TAR376G0522 Trochodendron aralioides HOM05D002182 ORTHO05D004671 5.5e-104 381.7 328 60.1
Thecc.01G137400 Theobroma cacao HOM05D002182 ORTHO05D004671 1.4e-102 377.1 326 58.6
Ca_16979_v3 Cicer arietinum L. HOM05D002182 ORTHO05D004671 4.0e-102 375.6 329 58.7
TPR.G33581 Trifolium pratense HOM05D002182 ORTHO05D004671 4.0e-102 375.6 343 57.7
Potri.005G067100 Populus trichocarpa HOM05D002182 ORTHO05D004671 5.2e-102 375.2 334 58.7
TWI79G1433 Tripterygium wilfordii HOM05D002182 ORTHO05D004671 4.4e-101 372.1 325 57.5
VMungo1309G0220 Vigna mungo HOM05D002182 ORTHO05D004671 7.5e-101 371.3 327 59.6
Lj1g0008046 Lotus japonicus HOM05D002182 ORTHO05D004671 9.7e-101 370.9 326 58.9
RcHm_v2.0_Chr2g0122231 Rosa chinensis HOM05D002182 ORTHO05D004671 3.7e-100 369.0 319 59.9
Sc16g0009510 Simmondsia chinensis HOM05D002182 ORTHO05D004671 3.7e-100 369.0 323 58.8
COL.COLO4_35815 Corchorus olitorius HOM05D002182 ORTHO05D004671 4.8e-100 368.6 329 56.8
FvH4_1g24710 Fragaria vesca HOM05D002182 ORTHO05D004671 8.2e-100 367.9 323 59.8
Gohir.A11G057700 Gossypium hirsutum HOM05D002182 ORTHO05D004671 2.4e-99 366.3 325 58.2
Duzib264G0915 Durio zibethinus HOM05D002182 ORTHO05D004671 5.3e-99 365.2 327 57.2
Phvul.009G154850 Phaseolus vulgaris HOM05D002182 ORTHO05D004671 9.1e-99 364.4 342 56.4
Glyma.06G155600 Glycine max HOM05D002182 ORTHO05D004671 1.2e-98 364.0 324 57.1
Prupe.4G275500 Prunus persica HOM05D002182 ORTHO05D004671 1.2e-98 364.0 327 58.7
Gohir.D11G061900 Gossypium hirsutum HOM05D002182 ORTHO05D004671 1.6e-98 363.6 325 57.8
EL10Ac4g09621 Beta vulgaris HOM05D002182 ORTHO05D004671 4.5e-98 362.1 328 57.3
CANSAT01G2275 Cannabis sativa HOM05D002182 ORTHO05D004671 5.9e-98 361.7 325 59.1
arahy.Tifrunner.gnm1.ann1.K5KUZ3 Arachis hypogaea HOM05D002182 ORTHO05D004671 1.0e-97 360.9 327 56.6
arahy.Tifrunner.gnm1.ann1.XVSB6Y Arachis hypogaea HOM05D002182 ORTHO05D004671 1.0e-97 360.9 333 56.2
Cc07_g19240 Coffea canephora HOM05D002182 ORTHO05D004671 1.0e-97 360.9 323 56.3
Atru.chr4.980 Acer truncatum HOM05D002182 ORTHO05D004671 2.2e-97 359.8 316 57.6
Gorai.007G066700 Gossypium raimondii HOM05D002182 ORTHO05D004671 2.9e-97 359.4 344 55.5
MD15G1134700 Malus domestica HOM05D002182 ORTHO05D004671 5.0e-97 358.6 379 52.5
Sabra05G0055200 Salix brachista HOM05D002182 ORTHO05D004671 5.0e-97 358.6 379 50.9
Sopen05g009910 Solanum pennellii HOM05D002182 ORTHO05D004671 8.5e-97 357.8 325 58.5
CAN.G163.2 Capsicum annuum HOM05D002182 ORTHO05D004671 6.8e-94 348.2 320 57.5
CsaV3_3G039390 Cucumis sativus L. HOM05D002182 ORTHO05D004671 2.6e-93 346.3 338 54.4
Medtr3g096640 Medicago truncatula HOM05D002182 ORTHO05D004671 4.4e-93 345.5 361 51.8
MELO3C009682.2 Cucumis melo HOM05D002182 ORTHO05D004671 9.8e-93 344.4 338 54.7
Aqoxy5G02289 Aquilegia oxysepala HOM05D002182 ORTHO05D004671 2.8e-92 342.8 335 55.8
Eucgr.H05141 Eucalyptus grandis HOM05D002182 ORTHO05D004671 2.8e-92 342.8 323 56.0
ClCG10G017010 Citrullus lanatus HOM05D002182 ORTHO05D004671 2.4e-91 339.7 328 54.9
Migut.H00803 Erythranthe guttata HOM05D002182 ORTHO05D004671 1.2e-90 337.4 326 55.8
Ah.06g191020 Amaranthus hybridus HOM05D002182 ORTHO05D004671 3.5e-90 335.9 339 52.8
Nn5g28440 Nelumbo nucifera HOM05D002182 ORTHO05D004671 5.9e-90 335.1 334 54.2
Psat5g060640 Pisum sativum HOM05D002182 ORTHO05D004671 2.5e-88 329.7 335 53.1
Hund21801 Selenicereus undatus HOM05D002182 ORTHO05D004671 3.6e-87 325.9 339 52.5
Ah.06g191010 Amaranthus hybridus HOM05D002617 ORTHO05D009035 4.0e-86 322.4 331 52.3
PGR102G1182 Punica granatum HOM05D002182 ORTHO05D004671 5.7e-85 318.5 318 52.5
ATR1001G007 Amborella trichopoda HOM05D002182 ORTHO05D004671 7.5e-85 318.2 327 53.5
HanXRQChr01g0016921 Helianthus annuus HOM05D002182 ORTHO05D004671 9.8e-85 317.8 323 50.8
PSO443G0075 Papaver somniferum HOM05D002182 ORTHO05D004671 3.7e-84 315.8 346 50.3
Manes.13G078050 Manihot esculenta HOM05D002182 ORTHO05D004671 2.4e-83 313.2 324 51.9
PSO384G2582 Papaver somniferum HOM05D002182 ORTHO05D004671 3.5e-82 309.3 344 49.7
Sed0010212 Sechium edule HOM05D002182 ORTHO05D004671 4.5e-82 308.9 326 51.5
ECA248G2894 Erigeron canadensis HOM05D002182 ORTHO05D004671 7.8e-82 308.1 341 46.9
Nitab4.5_0001277g0010 Nicotiana tabacum HOM05D002182 ORTHO05D004671 3.6e-79 299.3 255 60.0
Aa31LG1G17970 Aethionema arabicum HOM05D002182 ORTHO05D004671 8.9e-78 294.7 320 48.1
Sp2g26990 Schrenkiella parvula HOM05D002182 ORTHO05D004671 7.5e-77 291.6 328 46.0
AT5G63920 Arabidopsis thaliana HOM05D002182 ORTHO05D004671 1.1e-75 287.7 325 46.2
Carub.0008s2470 Capsella rubella HOM05D002182 ORTHO05D004671 1.1e-75 287.7 325 46.8
BcaB07g29709 Brassica carinata HOM05D002182 ORTHO05D004671 1.4e-75 287.3 325 46.2
AL8G41160 Arabidopsis lyrata HOM05D002182 ORTHO05D004671 4.1e-75 285.8 323 47.4
Thhalv10003618m.g Eutrema salsugineum HOM05D002182 ORTHO05D004671 3.5e-74 282.7 331 45.9
A02p43050 Brassica napus HOM05D002182 ORTHO05D004671 6.6e-73 278.5 325 45.5
BraA02t09226Z Brassica rapa HOM05D002182 ORTHO05D004671 8.6e-73 278.1 317 46.4
BcaC03g18232 Brassica carinata HOM05D002182 ORTHO05D004671 9.5e-72 274.6 325 44.9
SGA_v2.0_scaffold54G19590 Striga asiatica HOM05D002182 ORTHO05D004671 1.2e-71 274.2 322 49.1
THA.LOC104818422 Tarenaya hassleriana HOM05D002182 ORTHO05D004671 3.1e-70 269.6 256 54.3
Lj4C830T7 Lonicera japonica HOM05D002182 ORTHO05D004671 6.0e-66 255.4 284 50.0
MBI07_g43314_MAGBIO Magnolia biondii HOM05D002182 ORTHO05D004671 3.1e-62 243.0 299 46.5
HPP92_005917 Vanilla planifolia HOM05D002182 ORTHO05D004671 2.0e-61 240.4 265 51.7
AUR62006857 Chenopodium quinoa HOM05D002182 ORTHO05D004671 2.6e-61 240.0 351 42.7
Zm00001eb005010 Zea mays HOM05D002182 ORTHO05D004671 1.2e-58 231.1 310 44.8
FAN23G2071 Fragaria x ananassa HOM05D002182 ORTHO05D004671 3.5e-58 229.6 237 52.3
Ciclev10003112m.g Citrus clementina HOM05D002182 ORTHO05D004671 4.6e-58 229.2 198 56.6
Os03g0165000 Oryza sativa ssp. japonica HOM05D002182 ORTHO05D004671 5.6e-56 222.2 318 41.5
Lsat_1_v5_gn_1_78841 Lactuca sativa HOM05D002182 ORTHO05D004671 5.2e-54 215.7 243 44.9
Oeu050090.2 Olea europaea HOM05D002182 ORTHO05D004671 3.4e-53 213.0 326 41.1
AUR62000512 Chenopodium quinoa HOM05D002182 ORTHO05D004671 7.6e-53 211.8 339 40.1
Pp3c21_9710 Physcomitrium patens HOM05D002182 ORTHO05D004671 2.5e-48 196.8 387 36.4
Mapoly0113s0011 Marchantia polymorpha HOM05D002182 ORTHO05D004671 3.6e-47 193.0 343 34.7
AagrBONN_evm.TU.Sc2ySwM_228.5819 Anthoceros agrestis HOM05D002182 ORTHO05D004671 8.1e-47 191.8 275 41.5
C02p63020 Brassica napus HOM05D002182 ORTHO05D017531 2.4e-43 180.3 209 48.3
CSS0000135 Camellia sinensis var. sinensis HOM05D002182 ORTHO05D017531 9.3e-43 178.3 122 73.0
Haze_25328 Corylus avellana HOM05D002182 ORTHO05D017531 5.3e-38 162.5 125 68.8
Solyc05g014720.4 Solanum lycopersicum HOM05D002182 ORTHO05D004671 6.9e-38 162.2 181 53.6
unitig_62.g23375 Utricularia gibba HOM05D002182 ORTHO05D004671 1.3e-36 157.9 200 46.0
FAN19G2097 Fragaria x ananassa HOM05D002182 ORTHO05D004671 6.4e-36 155.6 317 34.4
CSS0039016 Camellia sinensis var. sinensis HOM05D002182 ORTHO05D004671 7.1e-35 152.1 84 84.5
FAN26G3457 Fragaria x ananassa HOM05D002182 ORTHO05D004671 1.1e-27 128.3 108 63.0
SMO114G0082 Selaginella moellendorffii HOM05D002182 ORTHO05D004671 7.1e-27 125.6 122 45.1
DCAR_023889 Daucus carota HOM05D002182 ORTHO05D004671 3.3e-24 116.7 142 45.1
QL10p041326 Quercus lobata HOM05D002182 ORTHO05D004671 2.1e-23 114.0 90 57.8
CDE09G0036 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 6.9e-22 109.0 127 45.7
FAN26G1134 Fragaria x ananassa HOM05D002182 ORTHO05D004671 2.0e-21 107.5 100 59.0
FAN26G0537 Fragaria x ananassa HOM05D002182 ORTHO05D004671 1.6e-18 97.8 83 53.0
Nitab4.5_0000120g0160 Nicotiana tabacum HOM05D002182 ORTHO05D004671 4.1e-14 83.2 47 76.6
Cpa.g.c33573 Carica papaya HOM05D002182 ORTHO05D017531 5.3e-14 82.8 80 55.0
SEGI_24428 Sequoiadendron giganteum HOM05D002182 ORTHO05D017531 1.2e-13 81.6 201 36.8
Solyc05g014730.1 Solanum lycopersicum HOM05D002182 ORTHO05D004671 2.6e-13 80.5 47 74.5
CBR_g74 Chara braunii HOM05D002182 ORTHO05D004671 7.7e-13 79.0 87 41.4
SEGI_40414 Sequoiadendron giganteum HOM05D002182 ORTHO05D004671 7.2e-11 72.4 59 54.2
SHI36071 Sapria himalayana HOM05D002182 ORTHO05D004671 1.2e-10 71.6 114 40.4
BolC3t18503H Brassica oleracea HOM05D002182 ORTHO05D017531 2.7e-10 70.5 75 50.7
SHI36070 Sapria himalayana HOM05D002182 ORTHO05D004671 3.9e-09 66.6 67 53.7
unitig_62.g23374 Utricularia gibba HOM05D002182 ORTHO05D004671 5.7e-08 62.8 41 61.0
CDE09G0788 Ceratophyllum demersum HOM05D002182 ORTHO05D004671 1.3e-07 61.6 46 58.7
A06p30540 Brassica napus HOM05D002182 ORTHO05D017531 4.8e-07 59.7 74 51.4
BraA06t26003Z Brassica rapa HOM05D002182 ORTHO05D017531 4.8e-07 59.7 74 51.4


User provided reference genes

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