Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro07118 Vaccinium macrocarpon HOM05D003978 ORTHO05D006033 1.1e-91 340.1 194 100.0
CSS0027147 Camellia sinensis var. sinensis HOM05D003978 ORTHO05D006033 4.4e-56 221.9 222 63.1
CSS0034790 Camellia sinensis var. sinensis HOM05D003978 ORTHO05D006033 4.4e-56 221.9 222 63.1
GSVIVG01016195001 Vitis vinifera HOM05D003978 ORTHO05D006033 7.3e-43 177.9 225 57.8
Sabra10G0177400 Salix brachista HOM05D003978 ORTHO05D006033 1.0e-41 174.1 224 54.0
QL08p053633 Quercus lobata HOM05D003978 ORTHO05D006033 1.8e-41 173.3 224 50.4
TPR.G26271 Trifolium pratense HOM05D003978 ORTHO05D006033 1.8e-41 173.3 225 54.7
arahy.Tifrunner.gnm1.ann1.SNA779 Arachis hypogaea HOM05D003978 ORTHO05D006033 2.3e-41 172.9 223 56.1
Potri.010G228700 Populus trichocarpa HOM05D003978 ORTHO05D006033 4.0e-41 172.2 224 55.4
arahy.Tifrunner.gnm1.ann1.3AH3YU Arachis hypogaea HOM05D003978 ORTHO05D006033 8.9e-41 171.0 223 55.6
Sabra08G0021900 Salix brachista HOM05D003978 ORTHO05D006033 5.8e-40 168.3 225 57.3
Cc02_g10770 Coffea canephora HOM05D003978 ORTHO05D006033 7.5e-40 167.9 221 50.7
Migut.F01713 Erythranthe guttata HOM05D003978 ORTHO05D006033 9.8e-40 167.5 228 49.1
MSTRG.9145 Avicennia marina HOM05D003978 ORTHO05D006033 2.2e-39 166.4 227 51.1
Actinidia03846 Actinidia chinensis HOM05D003978 ORTHO05D006033 1.4e-38 163.7 219 58.0
Glyma.10G276500 Glycine max HOM05D003978 ORTHO05D006033 1.9e-38 163.3 225 52.9
CiPaw.02G171600 Carya illinoinensis HOM05D003978 ORTHO05D006033 1.6e-37 160.2 226 49.6
Oeu013853.1 Olea europaea HOM05D003978 ORTHO05D006033 3.5e-37 159.1 257 43.2
Eucgr.J01044 Eucalyptus grandis HOM05D003978 ORTHO05D006033 4.6e-37 158.7 223 51.1
Glyma.20G113200 Glycine max HOM05D003978 ORTHO05D006033 6.0e-37 158.3 223 54.7
TWI63G1197 Tripterygium wilfordii HOM05D003978 ORTHO05D006033 7.8e-37 157.9 231 50.2
Lj5g0022774 Lotus japonicus HOM05D003978 ORTHO05D006033 1.7e-36 156.8 228 55.3
Dinv41792 Davidia involucrata HOM05D003978 ORTHO05D006033 3.0e-36 156.0 204 52.9
CSS0005536 Camellia sinensis var. sinensis HOM05D003978 ORTHO05D006033 3.9e-36 155.6 222 55.4
CsaV3_2G021100 Cucumis sativus L. HOM05D003978 ORTHO05D006033 5.0e-36 155.2 227 50.7
Manes.10G051200 Manihot esculenta HOM05D003978 ORTHO05D006033 6.6e-36 154.8 224 50.9
Ciclev10032520m.g Citrus clementina HOM05D003978 ORTHO05D006033 1.1e-35 154.1 226 49.6
Nn6g35249 Nelumbo nucifera HOM05D003978 ORTHO05D006033 1.5e-35 153.7 224 50.0
Ca_11194_v3 Cicer arietinum L. HOM05D003978 ORTHO05D006033 3.3e-35 152.5 226 51.8
CsaV3_2G020900 Cucumis sativus L. HOM05D003978 ORTHO05D006033 2.8e-34 149.4 196 55.6
Nitab4.5_0001359g0090 Nicotiana tabacum HOM05D003978 ORTHO05D006033 1.2e-32 144.1 223 51.1
Nitab4.5_0001278g0040 Nicotiana tabacum HOM05D003978 ORTHO05D006033 5.8e-32 141.7 223 49.3
TAR633G1384 Trochodendron aralioides HOM05D003978 ORTHO05D006033 5.8e-32 141.7 227 46.3
Cfa001800 Carpinus fangiana HOM05D003978 ORTHO05D006033 1.3e-31 140.6 222 46.4
Nitab4.5_0001450g0020 Nicotiana tabacum HOM05D003978 ORTHO05D006033 1.3e-31 140.6 226 45.1
DCAR_006405 Daucus carota HOM05D003978 ORTHO05D006033 1.7e-31 140.2 224 45.1
TWI38G1352 Tripterygium wilfordii HOM05D003978 ORTHO05D006033 3.7e-31 139.0 231 47.6
VMungo0720G1413 Vigna mungo HOM05D003978 ORTHO05D006033 4.9e-31 138.7 224 53.1
Potri.008G033000 Populus trichocarpa HOM05D003978 ORTHO05D006033 1.4e-30 137.1 223 47.5
Sopen03g019840 Solanum pennellii HOM05D003978 ORTHO05D006033 2.4e-30 136.3 224 48.7
PGR044G1831 Punica granatum HOM05D003978 ORTHO05D006033 3.2e-30 136.0 235 48.5
Solyc03g071560.4 Solanum lycopersicum HOM05D003978 ORTHO05D006033 3.2e-30 136.0 224 48.7
CANSAT64G1994 Cannabis sativa HOM05D003978 ORTHO05D006033 5.4e-30 135.2 221 52.5
Atru.chr12.875 Acer truncatum HOM05D003978 ORTHO05D006033 2.1e-29 133.3 225 46.2
CiPaw.01G267500 Carya illinoinensis HOM05D003978 ORTHO05D006033 2.7e-29 132.9 227 47.1
Phvul.007G025050 Phaseolus vulgaris HOM05D003978 ORTHO05D006033 2.7e-29 132.9 227 51.5
PGSC0003DMG400016922 Solanum tuberosum HOM05D003978 ORTHO05D006033 3.5e-29 132.5 224 45.1
Dinv37325 Davidia involucrata HOM05D006951 ORTHO05D008594 4.6e-29 132.1 227 49.8
QL07p042820 Quercus lobata HOM05D003978 ORTHO05D006033 6.0e-29 131.7 221 47.1
Sed0027411 Sechium edule HOM05D003978 ORTHO05D006033 7.8e-29 131.3 234 45.3
TAR636G3645 Trochodendron aralioides HOM05D001807 ORTHO05D002044 7.8e-29 131.3 233 44.6
Nitab4.5_0002285g0020 Nicotiana tabacum HOM05D003978 ORTHO05D006033 1.3e-28 130.6 226 46.5
Peaxi162Scf00145g00811 Petunia axillaris HOM05D003978 ORTHO05D006033 1.3e-28 130.6 232 46.6
Sed0011758 Sechium edule HOM05D003978 ORTHO05D006033 1.3e-28 130.6 235 44.7
Aqoxy2G01695 Aquilegia oxysepala HOM05D003978 ORTHO05D006033 2.3e-28 129.8 224 53.1
Aqoxy2G02465 Aquilegia oxysepala HOM05D003978 ORTHO05D006033 2.3e-28 129.8 225 53.3
Peaxi162Scf00253g00327 Petunia axillaris HOM05D003978 ORTHO05D006033 3.0e-28 129.4 191 47.1
MELO3C012401.2 Cucumis melo HOM05D003978 ORTHO05D006033 5.1e-28 128.6 231 49.4
Lj3A937G87 Lonicera japonica HOM05D003978 ORTHO05D006033 8.6e-28 127.9 237 42.6
CSS0048765 Camellia sinensis var. sinensis HOM05D003978 ORTHO05D006033 1.9e-27 126.7 226 43.8
TAR623G0946 Trochodendron aralioides HOM05D003978 ORTHO05D006033 1.9e-27 126.7 230 42.2
CsaV3_5G036020 Cucumis sativus L. HOM05D001446 ORTHO05D001360 3.3e-27 125.9 232 44.8
Lalb_Chr19g0129381 Lupinus albus HOM05D003978 ORTHO05D006033 2.1e-26 123.2 223 46.2
Prupe.2G206800 Prunus persica HOM05D003978 ORTHO05D006033 2.1e-26 123.2 225 49.3
ECA238G2158 Erigeron canadensis HOM05D003978 ORTHO05D006033 1.8e-25 120.2 223 45.3
Rhsim03G0089800 Rhododendron simsii HOM05D003978 ORTHO05D006033 3.1e-25 119.4 220 40.5
Psat6g229760 Pisum sativum HOM05D003978 ORTHO05D006033 6.8e-25 118.2 225 47.6
THA.LOC104816430 Tarenaya hassleriana HOM05D003978 ORTHO05D006033 1.5e-24 117.1 240 47.9
Duzib106G0034 Durio zibethinus HOM05D001807 ORTHO05D002044 2.0e-24 116.7 224 42.9
Solyc11g008210.3 Solanum lycopersicum HOM05D003978 ORTHO05D006033 2.0e-24 116.7 260 38.8
Oeu007407.1 Olea europaea HOM05D003978 ORTHO05D006033 9.9e-24 114.4 227 47.6
Sopen11g003980 Solanum pennellii HOM05D003978 ORTHO05D006033 9.9e-24 114.4 265 38.1
MBI04_g13679_MAGBIO Magnolia biondii HOM05D003978 ORTHO05D006033 1.3e-23 114.0 238 41.6
Lsat_1_v5_gn_2_113200 Lactuca sativa HOM05D003978 ORTHO05D006033 4.9e-23 112.1 230 47.0
vmacro07306 Vaccinium macrocarpon HOM05D003978 ORTHO05D006033 6.4e-23 111.7 224 38.8
TWI15G0746 Tripterygium wilfordii HOM05D003978 ORTHO05D006033 1.1e-22 110.9 235 48.1
Sed0002426 Sechium edule HOM05D003978 ORTHO05D006033 1.4e-22 110.5 233 40.8
Sc10g0008920 Simmondsia chinensis HOM05D003978 ORTHO05D006033 1.9e-22 110.2 226 47.8
COL.COLO4_36551 Corchorus olitorius HOM05D003978 ORTHO05D006033 4.1e-22 109.0 224 46.4
FAN03G0654 Fragaria x ananassa HOM05D003978 ORTHO05D006033 5.4e-22 108.6 228 48.2
FAN01G2622 Fragaria x ananassa HOM05D003978 ORTHO05D006033 7.1e-22 108.2 230 47.4
Lalb_Chr03g0036261 Lupinus albus HOM05D003978 ORTHO05D006033 1.2e-21 107.5 231 44.2
MSTRG.8127 Avicennia marina HOM05D003978 ORTHO05D006033 2.1e-21 106.7 224 38.8
PGSC0003DMG400031080 Solanum tuberosum HOM05D003978 ORTHO05D006033 2.7e-21 106.3 261 36.0
MD01G1101500 Malus domestica HOM05D003978 ORTHO05D006033 6.0e-21 105.1 229 45.9
MD07G1168200 Malus domestica HOM05D003978 ORTHO05D006033 1.3e-20 104.0 229 45.9
HanXRQChr14g0456531 Helianthus annuus HOM05D003978 ORTHO05D006033 5.1e-20 102.1 251 37.8
FvH4_7g18520 Fragaria vesca HOM05D003978 ORTHO05D006033 6.6e-20 101.7 229 45.9
FAN06G3745 Fragaria x ananassa HOM05D003978 ORTHO05D006033 6.6e-20 101.7 229 45.9
FAN10G1475 Fragaria x ananassa HOM05D003978 ORTHO05D006033 6.6e-20 101.7 229 45.9
ClCG05G021270 Citrullus lanatus HOM05D003978 ORTHO05D006033 1.1e-19 100.9 228 44.7
Duzib128G0911 Durio zibethinus HOM05D003978 ORTHO05D006033 1.9e-19 100.1 223 47.1
Rhsim03G0115000 Rhododendron simsii HOM05D003978 ORTHO05D006033 2.5e-19 99.8 173 44.5
FAN10G2862 Fragaria x ananassa HOM05D003978 ORTHO05D006033 4.3e-19 99.0 229 45.4
PSO339G1141 Papaver somniferum HOM05D003978 ORTHO05D006033 2.8e-18 96.3 243 49.4
FAN06G5022 Fragaria x ananassa HOM05D003978 ORTHO05D006033 3.6e-18 95.9 230 44.8
HPP92_017522 Vanilla planifolia HOM05D003978 ORTHO05D006033 6.2e-18 95.1 261 42.9
Gohir.A10G201200 Gossypium hirsutum HOM05D003978 ORTHO05D006033 1.1e-17 94.4 222 41.9
THA.LOC104823202 Tarenaya hassleriana HOM05D003978 ORTHO05D006033 1.1e-17 94.4 235 34.5
RcHm_v2.0_Chr1g0362301 Rosa chinensis HOM05D003978 ORTHO05D006033 3.1e-17 92.8 229 44.5
Thecc.10G086400 Theobroma cacao HOM05D003978 ORTHO05D006033 6.9e-17 91.7 221 40.7
CDE02G4598 Ceratophyllum demersum HOM05D003978 ORTHO05D006033 1.5e-16 90.5 241 38.6
PSO801G0725 Papaver somniferum HOM05D003978 ORTHO05D006033 2.6e-16 89.7 239 48.5
EL10Ac7g16661 Beta vulgaris HOM05D003978 ORTHO05D006033 3.4e-16 89.4 209 43.5
Gohir.D10G209000 Gossypium hirsutum HOM05D003978 ORTHO05D006033 4.4e-16 89.0 223 41.7
Gorai.011G235100 Gossypium raimondii HOM05D003978 ORTHO05D006033 4.4e-16 89.0 223 41.7
Duzib114G0897 Durio zibethinus HOM05D003978 ORTHO05D006033 1.3e-15 87.4 224 40.6
CDE02G3069 Ceratophyllum demersum HOM05D003978 ORTHO05D006033 3.8e-15 85.9 192 39.1
ATR0665G372 Amborella trichopoda HOM05D003978 ORTHO05D006033 8.4e-15 84.7 228 46.5
Cfa017638 Carpinus fangiana HOM05D003978 ORTHO05D006033 1.4e-14 84.0 224 36.6
Haze_20513 Corylus avellana HOM05D003978 ORTHO05D006033 2.4e-14 83.2 224 35.3
CANSAT80G2867 Cannabis sativa HOM05D003978 ORTHO05D006033 5.4e-14 82.0 221 37.6
Sed0020000 Sechium edule HOM05D003978 ORTHO05D006033 9.3e-14 81.3 228 43.9
THA.LOC104809978 Tarenaya hassleriana HOM05D003978 ORTHO05D006033 9.3e-14 81.3 233 34.3
Cpa.g.sc53.147 Carica papaya HOM05D003978 ORTHO05D006033 1.2e-13 80.9 130 46.2
SGA_v2.0_scaffold51G18710 Striga asiatica HOM05D003978 ORTHO05D006033 1.7e-12 77.0 225 39.6
C01p37200 Brassica napus HOM05D003978 ORTHO05D006033 3.0e-12 76.3 205 37.1
AUR62026923 Chenopodium quinoa HOM05D003978 ORTHO05D006033 6.6e-12 75.1 186 48.9
Thhalv10023624m.g Eutrema salsugineum HOM05D003978 ORTHO05D006033 2.5e-11 73.2 234 42.3
A09p17400 Brassica napus HOM05D029713 ORTHO05D027326 9.6e-11 71.2 182 34.6
Rhsim03G0088000 Rhododendron simsii HOM05D003978 ORTHO05D006033 1.1e-09 67.8 172 34.9
A03p01600 Brassica napus HOM05D003978 ORTHO05D006033 1.4e-09 67.4 248 39.9
BraA03t09534Z Brassica rapa HOM05D003978 ORTHO05D006033 1.4e-09 67.4 248 39.9
Oeu033869.1 Olea europaea HOM05D003978 ORTHO05D006033 1.4e-09 67.4 205 37.6
AT5G04280 Arabidopsis thaliana HOM05D003978 ORTHO05D006033 3.1e-09 66.2 257 34.2
C03p01930 Brassica napus HOM05D003978 ORTHO05D006033 5.3e-09 65.5 250 39.2
C09p21680 Brassica napus HOM05D029713 ORTHO05D027326 5.3e-09 65.5 186 34.4
BolC3t12747H Brassica oleracea HOM05D003978 ORTHO05D006033 5.3e-09 65.5 250 39.2
AL2G15940 Arabidopsis lyrata HOM05D003978 ORTHO05D006033 6.9e-09 65.1 220 41.8
BcaC04g22250 Brassica carinata HOM05D029713 ORTHO05D027326 1.5e-08 63.9 185 33.5
AT1G60650 Arabidopsis thaliana HOM05D003978 ORTHO05D006033 2.0e-08 63.5 229 41.0
Zm00001eb217310 Zea mays HOM05D003978 ORTHO05D006033 2.6e-08 63.2 253 36.0
AL6G13910 Arabidopsis lyrata HOM05D003978 ORTHO05D006033 3.4e-08 62.8 250 34.8
BolC9t55069H Brassica oleracea HOM05D029713 ORTHO05D027326 3.4e-08 62.8 186 33.9
CARHR209000 Cardamine hirsuta HOM05D003978 ORTHO05D006033 4.5e-08 62.4 249 33.7
SEGI_04637 Sequoiadendron giganteum HOM05D003978 ORTHO05D006033 5.8e-08 62.0 220 41.8
AUR62042058 Chenopodium quinoa HOM05D003978 ORTHO05D006033 7.6e-08 61.6 135 40.0
Zm00001eb053020 Zea mays HOM05D003978 ORTHO05D006033 1.7e-07 60.5 230 39.1
Sp6g38470 Schrenkiella parvula HOM05D003978 ORTHO05D006033 2.2e-07 60.1 253 32.4
Aa31LG1G21070 Aethionema arabicum HOM05D003978 ORTHO05D006033 3.8e-07 59.3 272 30.5
CARHR052280 Cardamine hirsuta HOM05D003978 ORTHO05D006033 6.4e-07 58.5 235 31.9
CDE09G0059 Ceratophyllum demersum HOM05D000278 ORTHO05D004673 2.4e-06 56.6 116 40.5
Carub.0006s0323 Capsella rubella HOM05D003978 ORTHO05D006033 3.2e-06 56.2 253 34.4
Haze_16751 Corylus avellana HOM05D003978 ORTHO05D006033 5.4e-06 55.5 55 63.6


User provided reference genes

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