Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05139 Vaccinium macrocarpon HOM05D000104 ORTHO05D003467 1.3e-191 672.9 358 100.0
Rhsim07G0163100 Rhododendron simsii HOM05D000104 ORTHO05D003467 1.6e-115 420.2 332 68.4
vmacro05141 Vaccinium macrocarpon HOM05D000104 ORTHO05D003467 1.8e-111 406.8 399 59.4
CSS0003293 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D003467 3.6e-96 355.9 331 59.5
Rhsim02G0208200 Rhododendron simsii HOM05D000104 ORTHO05D003467 3.4e-94 349.4 330 56.1
Haze_21436 Corylus avellana HOM05D000104 ORTHO05D003467 1.1e-92 344.4 333 57.1
CSS0032982 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D003467 2.0e-91 340.1 331 56.2
GSVIVG01035901001 Vitis vinifera HOM05D000104 ORTHO05D003467 3.5e-91 339.3 330 55.2
QL02p019684 Quercus lobata HOM05D000104 ORTHO05D003467 1.5e-89 334.0 332 56.6
CiPaw.08G007100 Carya illinoinensis HOM05D000104 ORTHO05D003467 2.8e-88 329.7 333 57.7
Sabra06G0204500 Salix brachista HOM05D000104 ORTHO05D003467 4.7e-88 328.9 330 54.5
Hma1.2p1_0392F.1_g143010 Hydrangea macrophylla HOM05D000104 ORTHO05D003467 1.8e-87 327.0 330 54.2
Atru.chr7.2524 Acer truncatum HOM05D000104 ORTHO05D003467 8.9e-87 324.7 329 53.2
Ciclev10010331m.g Citrus clementina HOM05D000104 ORTHO05D003467 8.9e-87 324.7 331 54.4
Sabra18G0023400 Salix brachista HOM05D000104 ORTHO05D003467 1.2e-86 324.3 335 52.8
Manes.16G127700 Manihot esculenta HOM05D000104 ORTHO05D003467 1.5e-86 323.9 332 53.0
Potri.006G262200 Populus trichocarpa HOM05D000104 ORTHO05D003467 1.5e-86 323.9 330 53.6
Gohir.A07G031300 Gossypium hirsutum HOM05D000104 ORTHO05D003467 9.8e-86 321.2 332 51.8
Manes.03G010400 Manihot esculenta HOM05D000104 ORTHO05D003467 9.8e-86 321.2 332 52.4
Gorai.001G036900 Gossypium raimondii HOM05D000104 ORTHO05D003467 2.2e-85 320.1 332 51.5
Duzib150G0247 Durio zibethinus HOM05D000104 ORTHO05D003467 3.7e-85 319.3 332 52.1
Glyma.04G062400 Glycine max HOM05D000104 ORTHO05D003467 3.7e-85 319.3 332 51.8
Gohir.D07G035100 Gossypium hirsutum HOM05D000104 ORTHO05D003467 6.4e-85 318.5 330 51.2
Dinv16472 Davidia involucrata HOM05D000104 ORTHO05D003467 1.1e-84 317.8 337 54.3
Glyma.06G063400 Glycine max HOM05D000104 ORTHO05D003467 1.8e-84 317.0 332 51.2
Potri.018G021100 Populus trichocarpa HOM05D000104 ORTHO05D003467 1.8e-84 317.0 337 51.9
Cc08_g00060 Coffea canephora HOM05D000104 ORTHO05D003467 3.2e-84 316.2 357 49.3
Prupe.1G391600 Prunus persica HOM05D000104 ORTHO05D003467 4.1e-84 315.8 332 52.4
Lj1g0020904 Lotus japonicus HOM05D000104 ORTHO05D003467 9.2e-84 314.7 335 52.5
Thecc.09G017400 Theobroma cacao HOM05D000104 ORTHO05D003467 2.0e-83 313.5 332 51.2
Ca_15766_v3 Cicer arietinum L. HOM05D000104 ORTHO05D003467 2.3e-82 310.1 332 51.2
Lalb_Chr08g0244361 Lupinus albus HOM05D000104 ORTHO05D003467 3.0e-82 309.7 330 50.6
Sopen06g024260 Solanum pennellii HOM05D000104 ORTHO05D003467 3.0e-82 309.7 357 49.6
TAR625G0155 Trochodendron aralioides HOM05D000104 ORTHO05D003467 3.0e-82 309.7 330 50.9
MELO3C016973.2 Cucumis melo HOM05D000104 ORTHO05D003467 5.0e-82 308.9 332 50.6
Oeu012636.1 Olea europaea HOM05D000104 ORTHO05D003467 6.6e-82 308.5 332 51.5
Solyc06g065730.3 Solanum lycopersicum HOM05D000104 ORTHO05D003467 6.6e-82 308.5 357 49.3
Nn2g12306 Nelumbo nucifera HOM05D000104 ORTHO05D003467 1.1e-81 307.8 331 51.1
Nitab4.5_0002503g0110 Nicotiana tabacum HOM05D000104 ORTHO05D003467 1.5e-81 307.4 359 48.2
Lalb_Chr23g0268291 Lupinus albus HOM05D000104 ORTHO05D003467 1.9e-81 307.0 366 47.3
ClCG05G016460 Citrullus lanatus HOM05D000104 ORTHO05D003467 3.3e-81 306.2 332 50.6
TPR.G3131 Trifolium pratense HOM05D000104 ORTHO05D003467 3.3e-81 306.2 332 51.2
Phvul.009G088700 Phaseolus vulgaris HOM05D000104 ORTHO05D003467 7.3e-81 305.1 334 50.0
Sed0013682 Sechium edule HOM05D000104 ORTHO05D003467 7.3e-81 305.1 370 47.3
Lj7A730T43 Lonicera japonica HOM05D000104 ORTHO05D003467 1.2e-80 304.3 345 52.5
Psat5g031880 Pisum sativum HOM05D000104 ORTHO05D003467 2.1e-80 303.5 371 47.7
Sed0022321 Sechium edule HOM05D000104 ORTHO05D003467 2.1e-80 303.5 332 49.4
Gohir.A13G179800 Gossypium hirsutum HOM05D000104 ORTHO05D003467 2.8e-80 303.1 332 50.3
Gorai.010G244100 Gossypium raimondii HOM05D000104 ORTHO05D003467 1.4e-79 300.8 332 50.0
VMungo1309G2115 Vigna mungo HOM05D000104 ORTHO05D003467 2.3e-79 300.1 334 49.7
arahy.Tifrunner.gnm1.ann1.QU94QB Arachis hypogaea HOM05D000104 ORTHO05D003467 3.1e-79 299.7 367 46.6
Peaxi162Scf00430g00415 Petunia axillaris HOM05D000104 ORTHO05D003467 3.1e-79 299.7 356 48.0
Medtr3g106210 Medicago truncatula HOM05D000104 ORTHO05D003467 8.9e-79 298.1 333 51.1
TWI63G1656 Tripterygium wilfordii HOM05D000104 ORTHO05D003467 1.5e-78 297.4 328 50.0
CsaV3_4G036700 Cucumis sativus L. HOM05D000104 ORTHO05D003467 2.0e-78 297.0 332 49.4
Lalb_Chr24g0402041 Lupinus albus HOM05D000104 ORTHO05D003467 2.0e-78 297.0 354 49.2
PGR044G1954 Punica granatum HOM05D000104 ORTHO05D003467 2.6e-78 296.6 330 50.0
Eucgr.G00556 Eucalyptus grandis HOM05D000104 ORTHO05D003467 3.4e-78 296.2 362 46.4
DCAR_003002 Daucus carota HOM05D000104 ORTHO05D003467 2.2e-77 293.5 352 48.3
CAN.G199.65 Capsicum annuum HOM05D000104 ORTHO05D003467 6.4e-77 292.0 359 47.4
EL10Ac2g04134 Beta vulgaris HOM05D000104 ORTHO05D003467 8.3e-77 291.6 330 48.5
Hund03464 Selenicereus undatus HOM05D000104 ORTHO05D003467 1.1e-76 291.2 330 47.6
Peaxi162Scf00632g00012 Petunia axillaris HOM05D000104 ORTHO05D003467 3.2e-76 289.7 362 47.0
AUR62031587 Chenopodium quinoa HOM05D000104 ORTHO05D003467 5.4e-76 288.9 334 47.6
Nitab4.5_0003811g0020 Nicotiana tabacum HOM05D000104 ORTHO05D003467 3.5e-75 286.2 396 43.7
Psat6g027200 Pisum sativum HOM05D000104 ORTHO05D003467 5.0e-74 282.3 332 47.9
Hund19597 Selenicereus undatus HOM05D000104 ORTHO05D003467 5.0e-74 282.3 335 46.9
FvH4_2g40920 Fragaria vesca HOM05D005818 ORTHO05D003467 8.6e-74 281.6 354 44.1
AUR62012463 Chenopodium quinoa HOM05D000104 ORTHO05D003467 1.1e-73 281.2 334 47.0
Sc09g0010480 Simmondsia chinensis HOM05D000104 ORTHO05D003467 1.9e-73 280.4 334 46.1
FAN20G2022 Fragaria x ananassa HOM05D000104 ORTHO05D003467 3.3e-73 279.6 334 46.1
Migut.A00006 Erythranthe guttata HOM05D000104 ORTHO05D003467 4.3e-73 279.3 393 42.7
PSO384G0886 Papaver somniferum HOM05D000104 ORTHO05D003467 4.3e-73 279.3 328 48.5
Ah.16g104930 Amaranthus hybridus HOM05D000104 ORTHO05D003467 1.2e-72 277.7 334 45.5
Lsat_1_v5_gn_1_42900 Lactuca sativa HOM05D000104 ORTHO05D003467 1.2e-72 277.7 330 48.8
FAN27G0005 Fragaria x ananassa HOM05D000104 ORTHO05D003467 1.6e-72 277.3 334 45.8
Aqoxy2G02630 Aquilegia oxysepala HOM05D000104 ORTHO05D003467 3.6e-72 276.2 332 47.9
Cpa.g.sc127.15 Carica papaya HOM05D000104 ORTHO05D003467 1.4e-71 274.2 329 45.3
HanXRQChr11g0353801 Helianthus annuus HOM05D000104 ORTHO05D003467 1.8e-71 273.9 332 47.0
RcHm_v2.0_Chr6g0299661 Rosa chinensis HOM05D000104 ORTHO05D003467 3.1e-71 273.1 365 47.7
MSTRG.11592 Avicennia marina HOM05D000104 ORTHO05D003467 5.2e-71 272.3 379 42.7
HanXRQChr01g0030671 Helianthus annuus HOM05D000104 ORTHO05D003467 6.8e-71 271.9 330 48.8
FAN15G1888 Fragaria x ananassa HOM05D000104 ORTHO05D003467 1.5e-70 270.8 341 44.6
vmacro11232 Vaccinium macrocarpon HOM05D000104 ORTHO05D003467 2.0e-70 270.4 558 34.4
Ah.10g035570 Amaranthus hybridus HOM05D000104 ORTHO05D003467 2.6e-70 270.0 331 45.0
DCAR_007677 Daucus carota HOM05D000104 ORTHO05D003467 3.4e-70 269.6 345 45.8
ECA248G2891 Erigeron canadensis HOM05D000104 ORTHO05D003467 4.4e-70 269.2 330 48.2
Sopen08g010020 Solanum pennellii HOM05D000104 ORTHO05D003467 4.4e-70 269.2 336 47.9
PSO339G0671 Papaver somniferum HOM05D000104 ORTHO05D003467 5.8e-70 268.9 328 46.6
Solyc08g029130.3 Solanum lycopersicum HOM05D000104 ORTHO05D003467 5.8e-70 268.9 336 47.9
Nitab4.5_0002973g0030 Nicotiana tabacum HOM05D000104 ORTHO05D003467 3.7e-69 266.2 341 46.9
MD15G1037700 Malus domestica HOM05D000104 ORTHO05D003467 1.1e-68 264.6 366 43.7
MD08G1058800 Malus domestica HOM05D000104 ORTHO05D003467 3.2e-68 263.1 366 42.9
Medtr1g013190 Medicago truncatula HOM05D000104 ORTHO05D003467 4.6e-67 259.2 325 44.6
TWI32G0850 Tripterygium wilfordii HOM05D000104 ORTHO05D003467 1.3e-66 257.7 329 46.2
Carub.0004s0475 Capsella rubella HOM05D000104 ORTHO05D003467 1.7e-66 257.3 355 42.8
Thhalv10000014m.g Eutrema salsugineum HOM05D000104 ORTHO05D003467 1.7e-66 257.3 331 44.4
Sp4g04150 Schrenkiella parvula HOM05D000104 ORTHO05D003467 8.6e-66 255.0 353 42.2
ATR1153G016 Amborella trichopoda HOM05D000104 ORTHO05D003467 1.1e-65 254.6 339 45.1
Oeu056768.1 Olea europaea HOM05D000104 ORTHO05D003467 1.1e-65 254.6 351 45.3
Lalb_Chr22g0361401 Lupinus albus HOM05D000104 ORTHO05D003467 2.5e-65 253.4 328 44.5
THA.LOC104803854 Tarenaya hassleriana HOM05D000104 ORTHO05D003467 5.6e-65 252.3 335 45.1
Aa31sc100G10 Aethionema arabicum HOM05D000104 ORTHO05D003467 9.5e-65 251.5 331 44.1
AT2G25170 Arabidopsis thaliana HOM05D000104 ORTHO05D003467 9.5e-65 251.5 333 43.5
BcaB08g35151 Brassica carinata HOM05D000104 ORTHO05D003467 1.2e-64 251.1 353 42.2
BraA09t40986Z Brassica rapa HOM05D000104 ORTHO05D003467 1.6e-64 250.8 355 42.3
A09p55830 Brassica napus HOM05D000104 ORTHO05D003467 2.8e-64 250.0 355 42.5
THA.LOC104803635 Tarenaya hassleriana HOM05D000104 ORTHO05D003467 4.7e-64 249.2 341 43.1
AL4G16380 Arabidopsis lyrata HOM05D000104 ORTHO05D003467 8.1e-64 248.4 355 42.3
BcaC07g40886 Brassica carinata HOM05D000104 ORTHO05D003467 1.1e-63 248.1 359 42.1
BolC8t51453H Brassica oleracea HOM05D000104 ORTHO05D003467 1.1e-63 248.1 359 42.1
C08p38830 Brassica napus HOM05D000104 ORTHO05D003467 1.8e-63 247.3 355 42.0
Phvul.001G046100 Phaseolus vulgaris HOM05D000104 ORTHO05D003467 8.9e-63 245.0 336 42.0
Glyma.17G217300 Glycine max HOM05D000104 ORTHO05D003467 5.8e-62 242.3 318 48.1
RcHm_v2.0_Chr3g0455421 Rosa chinensis HOM05D000104 ORTHO05D003467 7.6e-62 241.9 366 44.8
CDE06G2391 Ceratophyllum demersum HOM05D000104 ORTHO05D003467 8.4e-61 238.4 334 41.9
CARHR116490 Cardamine hirsuta HOM05D000104 ORTHO05D003467 7.1e-60 235.3 333 41.7
VMungo0647G2573 Vigna mungo HOM05D000104 ORTHO05D003467 1.7e-58 230.7 365 39.2
Actinidia22307 Actinidia chinensis HOM05D000104 ORTHO05D003467 9.6e-57 224.9 193 60.1
SEGI_33990 Sequoiadendron giganteum HOM05D000104 ORTHO05D003467 9.6e-57 224.9 381 37.3
TPR.G38889 Trifolium pratense HOM05D000104 ORTHO05D003467 4.0e-55 219.5 286 49.3
THA.LOC104804837 Tarenaya hassleriana HOM05D000104 ORTHO05D003467 3.5e-51 206.5 332 38.3
Oeu000758.1 Olea europaea HOM05D000104 ORTHO05D003467 3.9e-50 203.0 195 53.3
SGA_v2.0_scaffold20G09081 Striga asiatica HOM05D000104 ORTHO05D003467 6.6e-50 202.2 340 37.9
HPP92_004615 Vanilla planifolia HOM05D000104 ORTHO05D003467 8.7e-50 201.8 311 39.5
COL.COLO4_18936 Corchorus olitorius HOM05D000104 ORTHO05D003467 7.3e-49 198.7 220 50.5
Mapoly0010s0012 Marchantia polymorpha HOM05D000104 ORTHO05D003467 1.7e-45 187.6 338 37.3
SMO200G0085 Selaginella moellendorffii HOM05D000104 ORTHO05D003467 4.9e-45 186.0 336 36.0
Actinidia13200 Actinidia chinensis HOM05D000104 ORTHO05D003467 5.4e-44 182.6 224 48.2
Thhalv10027006m.g Eutrema salsugineum HOM05D000104 ORTHO05D003467 9.3e-44 181.8 329 34.7
Pp3c18_19040 Physcomitrium patens HOM05D000104 ORTHO05D003467 1.2e-43 181.4 316 37.7
Pp3c18_19045 Physcomitrium patens HOM05D000104 ORTHO05D003467 1.2e-43 181.4 316 37.7
Sp7g29720 Schrenkiella parvula HOM05D000104 ORTHO05D003467 1.6e-43 181.0 261 42.5
TPR.G26726 Trifolium pratense HOM05D000104 ORTHO05D003467 1.6e-43 181.0 248 41.9
TWI32G1204 Tripterygium wilfordii HOM05D000104 ORTHO05D003467 6.0e-43 179.1 194 49.0
Pp3c21_10800 Physcomitrium patens HOM05D000104 ORTHO05D003467 2.3e-42 177.2 313 37.7
Gohir.D13G187900 Gossypium hirsutum HOM05D000104 ORTHO05D003467 3.9e-42 176.4 191 49.7
THA.LOC104804839 Tarenaya hassleriana HOM05D000104 ORTHO05D003467 9.6e-41 171.8 258 38.8
SMO228G0183 Selaginella moellendorffii HOM05D000104 ORTHO05D003467 8.1e-40 168.7 325 35.7
Nitab4.5_0000486g0110 Nicotiana tabacum HOM05D000104 ORTHO05D003467 1.5e-38 164.5 148 60.1
C07p58980 Brassica napus HOM05D000104 ORTHO05D003467 6.4e-37 159.1 240 37.9
BcaC09g51983 Brassica carinata HOM05D000104 ORTHO05D003467 8.4e-37 158.7 207 43.0
C01p06980 Brassica napus HOM05D000104 ORTHO05D003467 8.4e-37 158.7 197 43.7
Os06g0183800 Oryza sativa ssp. japonica HOM05D000104 ORTHO05D003467 8.4e-37 158.7 320 32.8
A01p06320 Brassica napus HOM05D000104 ORTHO05D003467 9.3e-36 155.2 197 43.7
BraA01t00598Z Brassica rapa HOM05D000104 ORTHO05D003467 9.3e-36 155.2 197 43.7
A03p61110 Brassica napus HOM05D000104 ORTHO05D003467 2.1e-35 154.1 240 38.3
A01p06340 Brassica napus HOM05D000104 ORTHO05D003467 4.6e-35 152.9 217 41.5
BolC1t00694H Brassica oleracea HOM05D000104 ORTHO05D003467 4.6e-35 152.9 207 41.5
C01p07000 Brassica napus HOM05D000104 ORTHO05D003467 3.0e-34 150.2 217 40.6
BcaC09g51981 Brassica carinata HOM05D000104 ORTHO05D003467 3.9e-34 149.8 217 40.6
AT4G31900 Arabidopsis thaliana HOM05D000104 ORTHO05D003467 5.6e-33 146.0 248 35.9
BraA01t00599Z Brassica rapa HOM05D000104 ORTHO05D003467 7.4e-33 145.6 225 40.0
BolC1t00695H Brassica oleracea HOM05D000104 ORTHO05D003467 2.1e-32 144.1 225 39.1
CBR_g16815 Chara braunii HOM05D000104 ORTHO05D003467 1.4e-31 141.4 200 43.0
AL7G20000 Arabidopsis lyrata HOM05D000104 ORTHO05D003467 3.1e-31 140.2 224 36.2
Carub.0007s0864 Capsella rubella HOM05D000104 ORTHO05D003467 2.0e-30 137.5 215 38.1
BolC7t46345H Brassica oleracea HOM05D000104 ORTHO05D003467 3.8e-29 133.3 233 35.2
BraA03t15150Z Brassica rapa HOM05D000104 ORTHO05D003467 4.9e-29 132.9 231 36.8
TPR.G25705 Trifolium pratense HOM05D002753 ORTHO05D003467 9.3e-28 128.6 184 41.3
Nitab4.5_0000486g0100 Nicotiana tabacum HOM05D000104 ORTHO05D003467 1.3e-26 124.8 188 42.0
Actinidia16922 Actinidia chinensis HOM05D000104 ORTHO05D003467 9.0e-23 112.1 146 45.9
AL7G19990 Arabidopsis lyrata HOM05D000104 ORTHO05D003467 9.0e-23 112.1 250 32.4
Actinidia22434 Actinidia chinensis HOM05D002462 ORTHO05D002893 4.5e-22 109.8 132 48.5
Oeu000760.1 Olea europaea HOM05D000104 ORTHO05D003467 1.6e-19 101.3 126 45.2
COL.COLO4_18937 Corchorus olitorius HOM05D000104 ORTHO05D003467 2.7e-19 100.5 101 47.5
Ca_13055_v3 Cicer arietinum L. HOM05D000104 ORTHO05D003467 1.1e-17 95.1 209 34.4
HPP92_004610 Vanilla planifolia HOM05D000104 ORTHO05D003467 5.3e-15 86.3 100 45.0
SEGI_08777 Sequoiadendron giganteum HOM05D000104 ORTHO05D003467 2.0e-14 84.3 176 35.2
Cre08.g377200 Chlamydomonas reinhardtii HOM05D000104 ORTHO05D003467 5.0e-13 79.7 217 30.9
HPP92_004609 Vanilla planifolia HOM05D000104 ORTHO05D003467 4.7e-11 73.2 181 28.7
CSS0029706 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D003467 1.8e-10 71.2 57 57.9
CSS0037562 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D003467 2.0e-09 67.8 57 57.9
CSS0021251 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D003467 1.3e-08 65.1 57 54.4
AagrBONN_evm.TU.Sc2ySwM_344.1528 Anthoceros agrestis HOM05D000104 ORTHO05D003467 5.3e-07 59.7 143 28.7


User provided reference genes

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