Gene: CSS0032982
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0032982
- Transcript Identifier CSS0032982.1
- Gene Type Coding gene
- Location Chr14 : 3806985-3842710 : positive
Gene Family Information
- ID HOM05D000104
- #Genes/#Species 3097/100
- Phylogenetic origin
- ID ORTHO05D003467
- #Genes/#Species 222/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid CSS0032982.1
Descriptions
- Description PREDICTED: CHD3-type chromatin-remodeling factor PICKLE [Vitis vinifera]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048364 | ISO | PLAZA Integrative Orthology | root development | AT2G25170 |
| GO:0051301 | ISO | PLAZA Integrative Orthology | cell division | AT2G25170 |
| GO:0009739 | ISO | PLAZA Integrative Orthology | response to gibberellin | AT2G25170 |
| GO:0009992 | ISO | PLAZA Integrative Orthology | cellular water homeostasis | AT2G25170 |
| GO:0045892 | ISO | PLAZA Integrative Orthology | negative regulation of transcription, DNA-templated | AT2G25170 |
| GO:2000023 | ISO | PLAZA Integrative Orthology | regulation of lateral root development | AT2G25170 |
| GO:0009736 | ISO | PLAZA Integrative Orthology | cytokinin-activated signaling pathway | AT2G25170 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | AT2G25170 |
| GO:0009733 | ISO | PLAZA Integrative Orthology | response to auxin | AT2G25170 |
| GO:0009788 | ISO | PLAZA Integrative Orthology | negative regulation of abscisic acid-activated signaling pathway | AT2G25170 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0070615 | IEA | InterPro | nucleosome-dependent ATPase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT2G25170 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR001650 | Helicase, C-terminal |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR023780 | Chromo domain |
| IPR000330 | SNF2, N-terminal |
| IPR000953 | Chromo/chromo shadow domain |
| IPR016197 | Chromo-like domain superfamily |
| IPR009463 | Domain of unknown function DUF1087 |
| IPR038718 | SNF2-like, N-terminal domain superfamily |
| IPR001965 | Zinc finger, PHD-type |
| IPR009462 | Domain of unknown function DUF1086 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| Mapman id | Description |
|---|---|
| 12.4.7.2 | Chromatin organisation.nucleosome remodeling.CHD chromatin remodeling activities.CHD3-type chromatin remodeling factor (PKL/PKR) |