Gene: Nitab4.5_0003811g0020
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0003811g0020
- Transcript Identifier Nitab4.5_0003811g0020.1
- Gene Type Coding gene
- Location Nitab4.5_0003811 : 3375-25816 : positive
Gene Family Information
- ID HOM05D000104
- #Genes/#Species 3097/100
- Phylogenetic origin
- ID ORTHO05D003467
- #Genes/#Species 222/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Nitab4.5_0003811g0020.1
- SR1-identifier Nta11g08110.1
Descriptions
- Description SNF2-related, Zinc finger, RING/FYVE/PHD-type, Zinc finger, FYVE/PHD-type, Chromo domain/shadow, Helicase, superfamily 1/2, ATP-binding domain, Zinc finger, PHD-type, conserved site, Chromo domain-like, Zinc finger, PHD-finger, CHD, C-terminal 2, Domain of unknown function DUF1086, P-loop containing nucleoside triphosphate hydrolase, Rubredoxin-like domain, Homeodomain-like, Zinc finger, PHD-type, Helicase, C-terminal, Chromo domain
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0070615 | IEA | InterPro | nucleosome-dependent ATPase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR016197 | Chromo-like domain superfamily |
| IPR011011 | Zinc finger, FYVE/PHD-type |
| IPR009462 | Domain of unknown function DUF1086 |
| IPR000330 | SNF2, N-terminal |
| IPR023780 | Chromo domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR038718 | SNF2-like, N-terminal domain superfamily |
| IPR019787 | Zinc finger, PHD-finger |
| IPR001650 | Helicase, C-terminal |
| IPR001965 | Zinc finger, PHD-type |
| IPR012957 | CHD, C-terminal 2 |
| IPR000953 | Chromo/chromo shadow domain |
| Mapman id | Description |
|---|---|
| 12.4.7.2 | Chromatin organisation.nucleosome remodeling.CHD chromatin remodeling activities.CHD3-type chromatin remodeling factor (PKL/PKR) |