Gene: Solyc06g065730.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc06g065730.3
- Transcript Identifier Solyc06g065730.3.1
- Gene Type Coding gene
- Location SL4.0ch06 : 38810438-38848713 : positive
Gene Family Information
- ID HOM05D000104
- #Genes/#Species 3097/100
- Phylogenetic origin
- ID ORTHO05D003467
- #Genes/#Species 222/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc06g065730.3.1
- uniprot A0A3Q7GVY3
- gene_id Solyc06g065730
Descriptions
- Description CHD3-type chromatin-remodeling factor PICKLE (AHRD V3.3 *** A0A2G2ZAQ4_CAPAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0070615 | IEA | GOA Database | nucleosome-dependent ATPase activity | |
| GO:0070615 | IEA | InterPro | nucleosome-dependent ATPase activity | |
| GO:0000166 | IEA | GOA Database | nucleotide binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR009463 | Domain of unknown function DUF1087 |
| IPR016197 | Chromo-like domain superfamily |
| IPR009462 | Domain of unknown function DUF1086 |
| IPR038718 | SNF2-like, N-terminal domain superfamily |
| IPR023780 | Chromo domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR001650 | Helicase, C-terminal |
| IPR012957 | CHD, C-terminal 2 |
| IPR000953 | Chromo/chromo shadow domain |
| IPR000330 | SNF2, N-terminal |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| Mapman id | Description |
|---|---|
| 12.4.7.2 | Chromatin organisation.nucleosome remodeling.CHD chromatin remodeling activities.CHD3-type chromatin remodeling factor (PKL/PKR) |