Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_744.g24475 Utricularia gibba HOM05D005550 ORTHO05D006679 9.1e-90 333.6 170 100.0
Migut.A01122 Erythranthe guttata HOM05D005550 ORTHO05D006679 1.4e-74 283.1 156 90.4
FAN04G3230 Fragaria x ananassa HOM05D005550 ORTHO05D006679 3.5e-73 278.5 156 88.5
RcHm_v2.0_Chr7g0203731 Rosa chinensis HOM05D005550 ORTHO05D006679 7.7e-73 277.3 156 88.5
FAN08G0299 Fragaria x ananassa HOM05D005550 ORTHO05D006679 1.7e-72 276.2 163 84.0
FvH4_5g19230 Fragaria vesca HOM05D005550 ORTHO05D006679 8.5e-72 273.9 156 87.2
MSTRG.12114 Avicennia marina HOM05D005550 ORTHO05D006679 1.5e-71 273.1 156 87.2
HanXRQChr06g0164431 Helianthus annuus HOM05D005550 ORTHO05D006679 3.2e-71 271.9 156 87.2
Actinidia02146 Actinidia chinensis HOM05D005550 ORTHO05D006679 5.5e-71 271.2 156 87.8
SGA_v2.0_scaffold104G30171 Striga asiatica HOM05D005550 ORTHO05D006679 7.2e-71 270.8 156 87.2
Atru.chr9.1288 Acer truncatum HOM05D005550 ORTHO05D006679 9.4e-71 270.4 156 85.9
Lsat_1_v5_gn_3_1200 Lactuca sativa HOM05D005550 ORTHO05D006679 9.4e-71 270.4 157 87.9
Prupe.5G066100 Prunus persica HOM05D005550 ORTHO05D006679 9.4e-71 270.4 156 87.2
Thecc.03G248800 Theobroma cacao HOM05D005550 ORTHO05D006679 1.6e-70 269.6 156 85.3
CSS0014382 Camellia sinensis var. sinensis HOM05D005550 ORTHO05D006679 2.7e-70 268.9 156 87.8
COL.COLO4_37144 Corchorus olitorius HOM05D005550 ORTHO05D006679 2.7e-70 268.9 156 85.3
Hma1.2p1_1136F.1_g260510 Hydrangea macrophylla HOM05D005550 ORTHO05D006679 2.7e-70 268.9 156 86.5
Hma1.2p1_1136F.1_g260520 Hydrangea macrophylla HOM05D005550 ORTHO05D006679 2.7e-70 268.9 156 86.5
Potri.001G156200 Populus trichocarpa HOM05D005550 ORTHO05D006679 3.6e-70 268.5 156 84.6
Rhsim11G0009700 Rhododendron simsii HOM05D005550 ORTHO05D006679 8.0e-70 267.3 156 85.9
Ciclev10018920m.g Citrus clementina HOM05D005550 ORTHO05D006679 1.0e-69 266.9 156 84.6
Duzib068G0290 Durio zibethinus HOM05D005550 ORTHO05D006679 1.8e-69 266.2 156 84.6
FAN18G0162 Fragaria x ananassa HOM05D005550 ORTHO05D006679 1.8e-69 266.2 163 82.8
CANSAT21G2208 Cannabis sativa HOM05D005550 ORTHO05D006679 2.3e-69 265.8 156 84.6
QL12p011636 Quercus lobata HOM05D005550 ORTHO05D006679 2.3e-69 265.8 156 84.6
ECA248G1640 Erigeron canadensis HOM05D005550 ORTHO05D006679 6.8e-69 264.2 157 84.7
TAR375G0818 Trochodendron aralioides HOM05D005550 ORTHO05D006679 6.8e-69 264.2 154 86.4
EL10Ac5g12365 Beta vulgaris HOM05D005550 ORTHO05D006679 1.2e-68 263.5 156 86.5
Sc22g0000960 Simmondsia chinensis HOM05D005550 ORTHO05D006679 1.2e-68 263.5 156 84.6
Sed0012504 Sechium edule HOM05D005550 ORTHO05D006679 1.5e-68 263.1 156 83.3
CiPaw.11G081300 Carya illinoinensis HOM05D005550 ORTHO05D006679 2.0e-68 262.7 156 83.3
Gorai.008G234100 Gossypium raimondii HOM05D005550 ORTHO05D006679 2.0e-68 262.7 156 84.0
Sopen08g003270 Solanum pennellii HOM05D005550 ORTHO05D006679 2.0e-68 262.7 156 85.3
TWI15G1253 Tripterygium wilfordii HOM05D005550 ORTHO05D006679 2.0e-68 262.7 156 84.0
MBI04_g09523_MAGBIO Magnolia biondii HOM05D005550 ORTHO05D006679 3.4e-68 261.9 156 85.3
AUR62019968 Chenopodium quinoa HOM05D005550 ORTHO05D006679 5.7e-68 261.2 156 84.6
Solyc08g007330.3 Solanum lycopersicum HOM05D005550 ORTHO05D006679 5.7e-68 261.2 156 85.3
Gohir.D12G218532 Gossypium hirsutum HOM05D005550 ORTHO05D006679 7.5e-68 260.8 156 83.3
PGR042G2104 Punica granatum HOM05D005550 ORTHO05D006679 9.8e-68 260.4 156 84.6
Nitab4.5_0002225g0010 Nicotiana tabacum HOM05D005550 ORTHO05D006679 1.3e-67 260.0 156 84.0
AUR62007105 Chenopodium quinoa HOM05D005550 ORTHO05D006679 6.3e-67 257.7 156 84.0
ClCG01G004190 Citrullus lanatus HOM05D005550 ORTHO05D006679 6.3e-67 257.7 156 83.3
MELO3C005519.2 Cucumis melo HOM05D005550 ORTHO05D006679 8.3e-67 257.3 156 83.3
Eucgr.E00409 Eucalyptus grandis HOM05D005550 ORTHO05D006679 8.3e-67 257.3 156 84.6
Hund11605 Selenicereus undatus HOM05D005550 ORTHO05D006679 1.4e-66 256.5 156 82.7
Glyma.11G034600 Glycine max HOM05D005550 ORTHO05D006679 1.8e-66 256.1 156 81.4
Sabra01G0134700 Salix brachista HOM05D005550 ORTHO05D006679 1.8e-66 256.1 156 80.8
Aqoxy7G00819 Aquilegia oxysepala HOM05D005550 ORTHO05D006679 2.4e-66 255.8 155 82.6
PSO063G2362 Papaver somniferum HOM05D005550 ORTHO05D006679 4.1e-66 255.0 161 80.7
THA.LOC104812808 Tarenaya hassleriana HOM05D005550 ORTHO05D006679 4.1e-66 255.0 156 82.7
Cc08_g12230 Coffea canephora HOM05D005550 ORTHO05D006679 5.4e-66 254.6 154 83.1
PSO782G0795 Papaver somniferum HOM05D005550 ORTHO05D006679 5.4e-66 254.6 151 84.1
Nn6g33903 Nelumbo nucifera HOM05D005550 ORTHO05D006679 7.0e-66 254.2 154 81.8
CsaV3_5G004390 Cucumis sativus L. HOM05D005550 ORTHO05D006679 1.6e-65 253.1 150 83.3
AT4G17380 Arabidopsis thaliana HOM05D005550 ORTHO05D006679 3.5e-65 251.9 156 81.4
BcaC07g38064 Brassica carinata HOM05D005550 ORTHO05D006679 3.5e-65 251.9 156 81.4
BolC8t48465H Brassica oleracea HOM05D005550 ORTHO05D006679 3.5e-65 251.9 156 81.4
Thhalv10024454m.g Eutrema salsugineum HOM05D005550 ORTHO05D006679 3.5e-65 251.9 156 81.4
AL7G37330 Arabidopsis lyrata HOM05D005550 ORTHO05D006679 4.5e-65 251.5 156 80.8
Carub.0007s2403 Capsella rubella HOM05D005550 ORTHO05D006679 4.5e-65 251.5 156 80.8
BraA08t33293Z Brassica rapa HOM05D005550 ORTHO05D006679 1.0e-64 250.4 156 80.1
CARHR223990 Cardamine hirsuta HOM05D005550 ORTHO05D006679 1.3e-64 250.0 156 80.1
A08p13130 Brassica napus HOM05D005550 ORTHO05D006679 1.7e-64 249.6 156 80.8
arahy.Tifrunner.gnm1.ann1.7NLF36 Arachis hypogaea HOM05D005550 ORTHO05D006679 2.9e-64 248.8 156 80.8
arahy.Tifrunner.gnm1.ann1.XE7N8H Arachis hypogaea HOM05D005550 ORTHO05D006679 3.8e-64 248.4 156 80.1
SalBow6G3355 Salvia bowleyana HOM05D005550 ORTHO05D006679 6.5e-64 247.7 186 72.6
Phvul.002G057100 Phaseolus vulgaris HOM05D005550 ORTHO05D006679 1.5e-63 246.5 156 78.2
VMungo1215G0570 Vigna mungo HOM05D005550 ORTHO05D006679 1.5e-63 246.5 156 80.1
Medtr5g012900 Medicago truncatula HOM05D005550 ORTHO05D006679 3.2e-63 245.4 156 79.5
Lj2g0021636 Lotus japonicus HOM05D005550 ORTHO05D006679 1.6e-62 243.0 156 76.9
Ca_24591_v3 Cicer arietinum L. HOM05D005550 ORTHO05D006679 2.7e-62 242.3 156 77.6
Haze_16325 Corylus avellana HOM05D005550 ORTHO05D006679 2.7e-62 242.3 143 84.6
Os07g0486000 Oryza sativa ssp. japonica HOM05D005550 ORTHO05D006679 6.1e-62 241.1 151 78.8
GSVIVG01004726001 Vitis vinifera HOM05D005550 ORTHO05D006679 1.0e-61 240.4 140 86.4
Lj2C221G5 Lonicera japonica HOM05D005550 ORTHO05D006679 1.8e-61 239.6 139 87.8
ATR0057G027 Amborella trichopoda HOM05D005550 ORTHO05D006679 4.0e-61 238.4 156 73.7
Nitab4.5_0000712g0130 Nicotiana tabacum HOM05D005550 ORTHO05D006679 1.5e-60 236.5 193 67.9
Psat2g176640 Pisum sativum HOM05D005550 ORTHO05D006679 1.5e-60 236.5 156 75.0
SHI20465 Sapria himalayana HOM05D005550 ORTHO05D006679 2.0e-60 236.1 156 75.0
BcaB04g18410 Brassica carinata HOM05D005550 ORTHO05D006679 3.4e-60 235.3 185 68.1
TPR.G18117 Trifolium pratense HOM05D005550 ORTHO05D006679 3.4e-60 235.3 156 75.0
Aa31LG6G120 Aethionema arabicum HOM05D005550 ORTHO05D006679 2.8e-59 232.3 171 70.8
Lalb_Chr16g0379511 Lupinus albus HOM05D005550 ORTHO05D006679 7.3e-55 217.6 169 68.6
HPP92_025386 Vanilla planifolia HOM05D005550 ORTHO05D006679 6.8e-53 211.1 135 75.6
BolC8t48469H Brassica oleracea HOM05D005550 ORTHO05D006679 5.7e-52 208.0 131 80.2
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 6.4e-51 204.5 137 75.9
vmacro00189 Vaccinium macrocarpon HOM05D005550 ORTHO05D006679 1.2e-49 200.3 120 85.0
SEGI_18944 Sequoiadendron giganteum HOM05D005550 ORTHO05D006679 2.3e-48 196.1 136 72.8
MD04G1062200 Malus domestica HOM05D005550 ORTHO05D006679 7.8e-41 171.0 97 84.5
Mapoly0001s0167 Marchantia polymorpha HOM05D005550 ORTHO05D006679 7.8e-41 171.0 157 56.1
Pp3c2_940 Physcomitrium patens HOM05D005550 ORTHO05D006679 1.1e-39 167.2 148 55.4
Peaxi162Scf00102g01071 Petunia axillaris HOM05D005550 ORTHO05D006679 5.6e-39 164.9 128 70.3
DCAR_006840 Daucus carota HOM05D005550 ORTHO05D006679 9.5e-39 164.1 97 81.4
AagrBONN_evm.TU.Sc2ySwM_344.184 Anthoceros agrestis HOM05D005550 ORTHO05D006679 1.6e-38 163.3 169 47.3
SMO340G0170 Selaginella moellendorffii HOM05D005550 ORTHO05D006679 3.5e-33 145.6 169 47.9
BcaC07g38067 Brassica carinata HOM05D005550 ORTHO05D006679 1.0e-32 144.1 91 82.4
Cpa.g.sc29.180 Carica papaya HOM05D005550 ORTHO05D006679 3.9e-32 142.1 87 80.5
CDE04G2441 Ceratophyllum demersum HOM05D005550 ORTHO05D006679 1.1e-29 134.0 110 60.0
Potri.003G078601 Populus trichocarpa HOM05D005550 ORTHO05D006679 4.6e-17 92.0 52 82.7
MBI06_g10737_MAGBIO Magnolia biondii HOM05D003318 ORTHO05D011024 9.6e-15 84.3 53 75.5
Nn1g05728 Nelumbo nucifera HOM05D005550 ORTHO05D006679 1.3e-11 73.9 57 70.2
Nn1g05737 Nelumbo nucifera HOM05D005550 ORTHO05D006679 1.3e-11 73.9 57 70.2
MBI15_g30439_MAGBIO Magnolia biondii HOM05D005550 ORTHO05D011024 1.7e-11 73.6 41 80.5
CBR_g547 Chara braunii HOM05D005550 ORTHO05D006679 1.9e-10 70.1 139 34.5
MBI06_g16692_MAGBIO Magnolia biondii HOM05D003318 ORTHO05D008292 1.9e-10 70.1 39 82.1
PRCOL_00003604 Prasinoderma coloniale HOM05D005550 ORTHO05D006679 1.3e-08 63.9 146 35.6
MCO13G611 Micromonas commoda HOM05D005550 ORTHO05D006679 3.7e-06 55.8 134 35.8


User provided reference genes

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