Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_27.g25357 Utricularia gibba HOM05D006414 ORTHO05D007780 4.5e-77 291.2 148 100.0
unitig_28.g29440 Utricularia gibba HOM05D006414 ORTHO05D007780 1.9e-59 232.6 116 100.0
MSTRG.2541 Avicennia marina HOM05D006414 ORTHO05D007780 4.9e-23 111.7 96 60.4
Migut.H02413 Erythranthe guttata HOM05D006414 ORTHO05D007780 5.4e-22 108.2 126 53.2
Oeu028531.1 Olea europaea HOM05D006414 ORTHO05D007780 1.0e-20 104.0 123 49.6
SalBow6G5148 Salvia bowleyana HOM05D006414 ORTHO05D007780 3.0e-20 102.4 84 61.9
Lj2A560T64 Lonicera japonica HOM05D006414 ORTHO05D007780 5.1e-20 101.7 111 51.4
SalBow6G2882 Salvia bowleyana HOM05D006414 ORTHO05D007780 8.6e-20 100.9 84 60.7
SalBow6G7209 Salvia bowleyana HOM05D006414 ORTHO05D007780 8.6e-20 100.9 84 60.7
SalBow8G0663 Salvia bowleyana HOM05D000608 ORTHO05D007780 8.6e-20 100.9 124 46.8
Dinv19510 Davidia involucrata HOM05D006414 ORTHO05D007780 3.3e-19 99.0 116 51.7
EL10Ac6g14730 Beta vulgaris HOM05D006414 ORTHO05D007780 4.3e-19 98.6 71 67.6
SalBow8G2565 Salvia bowleyana HOM05D000608 ORTHO05D007780 4.3e-19 98.6 84 60.7
Ah.03g149270 Amaranthus hybridus HOM05D006414 ORTHO05D007780 7.3e-19 97.8 56 75.0
AUR62016261 Chenopodium quinoa HOM05D006414 ORTHO05D007780 9.5e-19 97.4 57 75.4
AUR62043752 Chenopodium quinoa HOM05D006414 ORTHO05D007780 9.5e-19 97.4 57 75.4
Rhsim08G0008000 Rhododendron simsii HOM05D006414 ORTHO05D007780 1.2e-18 97.1 90 52.2
Solyc04g054270.4 Solanum lycopersicum HOM05D006414 ORTHO05D007780 1.6e-18 96.7 68 67.6
Sopen04g023860 Solanum pennellii HOM05D006414 ORTHO05D007780 1.6e-18 96.7 68 67.6
PGSC0003DMG400012802 Solanum tuberosum HOM05D006414 ORTHO05D007780 1.6e-18 96.7 68 67.6
AUR62003321 Chenopodium quinoa HOM05D006414 ORTHO05D007780 2.1e-18 96.3 57 73.7
SGA_v2.0_scaffold2G01307 Striga asiatica HOM05D006414 ORTHO05D007780 2.1e-18 96.3 85 57.6
Peaxi162Scf01651g00012 Petunia axillaris HOM05D006414 ORTHO05D007780 8.1e-18 94.4 59 72.9
Potri.005G082400 Populus trichocarpa HOM05D006414 ORTHO05D007780 8.1e-18 94.4 68 64.7
Rhsim05G0180100 Rhododendron simsii HOM05D006414 ORTHO05D007780 8.1e-18 94.4 92 52.2
Cc07_g15860 Coffea canephora HOM05D006414 ORTHO05D007780 1.1e-17 94.0 81 64.2
PGR004G0335 Punica granatum HOM05D006414 ORTHO05D007780 1.1e-17 94.0 94 50.0
TAR376G1012 Trochodendron aralioides HOM05D006414 ORTHO05D007780 1.1e-17 94.0 71 62.0
CAN.G382.6 Capsicum annuum HOM05D006414 ORTHO05D007780 1.4e-17 93.6 78 62.8
Nitab4.5_0000156g0020 Nicotiana tabacum HOM05D006414 ORTHO05D007780 1.4e-17 93.6 71 64.8
Sabra05G0067400 Salix brachista HOM05D006414 ORTHO05D007780 2.3e-17 92.8 68 64.7
ECA238G3570 Erigeron canadensis HOM05D006414 ORTHO05D007780 3.1e-17 92.4 76 65.8
FAN07G2537 Fragaria x ananassa HOM05D006414 ORTHO05D007780 3.1e-17 92.4 69 62.3
FAN12G1220 Fragaria x ananassa HOM05D006414 ORTHO05D007780 3.1e-17 92.4 69 62.3
FAN12G2815 Fragaria x ananassa HOM05D006414 ORTHO05D007780 4.0e-17 92.0 55 72.7
CsaV3_6G045830 Cucumis sativus L. HOM05D006414 ORTHO05D007780 5.2e-17 91.7 71 59.2
HanXRQChr07g0202341 Helianthus annuus HOM05D006414 ORTHO05D007780 5.2e-17 91.7 64 67.2
MD03G1187700 Malus domestica HOM05D006414 ORTHO05D007780 5.2e-17 91.7 71 59.2
RcHm_v2.0_Chr4g0409671 Rosa chinensis HOM05D006414 ORTHO05D007780 5.2e-17 91.7 70 61.4
TWI74G0679 Tripterygium wilfordii HOM05D006414 ORTHO05D007780 5.2e-17 91.7 93 49.5
MELO3C007791.2 Cucumis melo HOM05D006414 ORTHO05D007780 6.8e-17 91.3 64 62.5
FvH4_4g12030 Fragaria vesca HOM05D006414 ORTHO05D007780 8.9e-17 90.9 70 61.4
Gorai.011G111900 Gossypium raimondii HOM05D006414 ORTHO05D007780 8.9e-17 90.9 108 46.3
TPR.G2171 Trifolium pratense HOM05D006414 ORTHO05D007780 8.9e-17 90.9 105 49.5
Ca_17703_v3 Cicer arietinum L. HOM05D006414 ORTHO05D007780 1.2e-16 90.5 67 64.2
Gohir.D10G102200 Gossypium hirsutum HOM05D006414 ORTHO05D007780 1.2e-16 90.5 108 46.3
Atru.chr4.307 Acer truncatum HOM05D006414 ORTHO05D007780 1.5e-16 90.1 71 60.6
Aqoxy6G00504 Aquilegia oxysepala HOM05D006414 ORTHO05D007780 1.5e-16 90.1 71 62.0
CiPaw.04G093800 Carya illinoinensis HOM05D006414 ORTHO05D007780 1.5e-16 90.1 82 57.3
Ciclev10025440m.g Citrus clementina HOM05D006414 ORTHO05D007780 1.5e-16 90.1 71 59.2
QL06p032569 Quercus lobata HOM05D006414 ORTHO05D007780 1.5e-16 90.1 55 72.7
GSVIVG01022204001 Vitis vinifera HOM05D006414 ORTHO05D007780 1.5e-16 90.1 71 62.0
Duzib147G0014 Durio zibethinus HOM05D006414 ORTHO05D007780 2.0e-16 89.7 87 52.9
Sc03g0004230 Simmondsia chinensis HOM05D006414 ORTHO05D007780 2.0e-16 89.7 71 60.6
Thecc.01G110400 Theobroma cacao HOM05D006414 ORTHO05D007780 2.0e-16 89.7 71 60.6
Gohir.A10G086500 Gossypium hirsutum HOM05D006414 ORTHO05D007780 2.6e-16 89.4 87 51.7
ClCG01G019140 Citrullus lanatus HOM05D006414 ORTHO05D007780 3.4e-16 89.0 64 62.5
Phvul.002G263600 Phaseolus vulgaris HOM05D006414 ORTHO05D007780 3.4e-16 89.0 102 48.0
Sed0012904 Sechium edule HOM05D006414 ORTHO05D007780 3.4e-16 89.0 63 66.7
BraA01t00058Z Brassica rapa HOM05D006414 ORTHO05D007780 4.4e-16 88.6 122 45.1
DCAR_000987 Daucus carota HOM05D006414 ORTHO05D007780 5.8e-16 88.2 71 56.3
Haze_14271 Corylus avellana HOM05D006414 ORTHO05D007780 7.5e-16 87.8 71 60.6
Prupe.4G236100 Prunus persica HOM05D006414 ORTHO05D007780 7.5e-16 87.8 71 54.9
vmacro18623 Vaccinium macrocarpon HOM05D006414 ORTHO05D007780 9.9e-16 87.4 103 46.6
Lsat_1_v5_gn_2_117881 Lactuca sativa HOM05D006414 ORTHO05D007780 1.7e-15 86.7 63 68.3
Lj4g0018166 Lotus japonicus HOM05D006414 ORTHO05D007780 1.7e-15 86.7 106 46.2
Medtr8g091670 Medicago truncatula HOM05D006414 ORTHO05D007780 1.7e-15 86.7 58 69.0
VMungo0251G0422 Vigna mungo HOM05D006414 ORTHO05D007780 1.7e-15 86.7 109 45.9
Lalb_Chr07g0184891 Lupinus albus HOM05D006414 ORTHO05D007780 4.9e-15 85.1 106 46.2
CSS0011059 Camellia sinensis var. sinensis HOM05D006414 ORTHO05D007780 6.4e-15 84.7 78 56.4
CSS0026013 Camellia sinensis var. sinensis HOM05D006414 ORTHO05D007780 6.4e-15 84.7 78 56.4
THA.LOC104807720 Tarenaya hassleriana HOM05D006414 ORTHO05D007780 6.4e-15 84.7 50 74.0
Actinidia16042 Actinidia chinensis HOM05D006414 ORTHO05D007780 8.3e-15 84.3 58 65.5
AL7G11770 Arabidopsis lyrata HOM05D006414 ORTHO05D007780 8.3e-15 84.3 58 67.2
Psat7g051760 Pisum sativum HOM05D006414 ORTHO05D007780 1.1e-14 84.0 119 47.1
CARHR247110 Cardamine hirsuta HOM05D006414 ORTHO05D007780 1.4e-14 83.6 58 65.5
Actinidia20120 Actinidia chinensis HOM05D006414 ORTHO05D007780 1.9e-14 83.2 88 51.1
AT4G39620 Arabidopsis thaliana HOM05D006414 ORTHO05D007780 1.9e-14 83.2 58 65.5
Cpa.g.sc2736.1 Carica papaya HOM05D006414 ORTHO05D007780 1.9e-14 83.2 112 45.5
Glyma.05G182700 Glycine max HOM05D006414 ORTHO05D007780 1.9e-14 83.2 77 59.7
Sp7g36270 Schrenkiella parvula HOM05D006414 ORTHO05D007780 1.9e-14 83.2 58 65.5
Aa31LG6G15650 Aethionema arabicum HOM05D006414 ORTHO05D007780 2.4e-14 82.8 50 72.0
BcaNung06694 Brassica carinata HOM05D006414 ORTHO05D007780 3.2e-14 82.4 50 72.0
Eucgr.L02634 Eucalyptus grandis HOM05D006414 ORTHO05D007780 3.2e-14 82.4 83 54.2
Thhalv10024997m.g Eutrema salsugineum HOM05D006414 ORTHO05D007780 4.1e-14 82.0 111 45.9
BcaNung00882 Brassica carinata HOM05D006414 ORTHO05D007780 9.2e-14 80.9 108 45.4
A01p00510 Brassica napus HOM05D006414 ORTHO05D007780 9.2e-14 80.9 108 45.4
C01p00660 Brassica napus HOM05D006414 ORTHO05D007780 9.2e-14 80.9 108 45.4
Carub.0007s0149 Capsella rubella HOM05D006414 ORTHO05D007780 9.2e-14 80.9 58 63.8
CDE10G0169 Ceratophyllum demersum HOM05D006414 ORTHO05D007780 9.2e-14 80.9 66 62.1
ATR0681G202 Amborella trichopoda HOM05D006414 ORTHO05D007780 1.6e-13 80.1 64 59.4
Glyma.08G140300 Glycine max HOM05D006414 ORTHO05D007780 2.1e-13 79.7 109 47.7
HPP92_016845 Vanilla planifolia HOM05D006414 ORTHO05D007780 2.1e-13 79.7 90 46.7
arahy.Tifrunner.gnm1.ann1.F90T56 Arachis hypogaea HOM05D006414 ORTHO05D007780 2.3e-12 76.3 78 51.3
arahy.Tifrunner.gnm1.ann1.N3YXA0 Arachis hypogaea HOM05D006414 ORTHO05D007780 2.3e-12 76.3 78 51.3
arahy.Tifrunner.gnm1.ann1.BPVH0U Arachis hypogaea HOM05D006414 ORTHO05D007780 3.0e-12 75.9 78 48.7
Eucgr.I00342 Eucalyptus grandis HOM05D006414 ORTHO05D007780 3.9e-12 75.5 45 71.1
arahy.Tifrunner.gnm1.ann1.S4ITMM Arachis hypogaea HOM05D006414 ORTHO05D007780 8.6e-12 74.3 74 52.7
Zm00001eb194340 Zea mays HOM05D006414 ORTHO05D007780 1.2e-08 63.9 64 46.9


User provided reference genes

Program Settings