Gene: Potri.005G082400
General Information
Structural Information
- Species Populus trichocarpa
- Gene Identifier Potri.005G082400
- Transcript Identifier Potri.005G082400.1
- Gene Type Coding gene
- Location Chr05 : 5617836-5619892 : positive
Gene Family Information
- ID HOM05D006414
- #Genes/#Species 124/89
- Phylogenetic origin
- ID ORTHO05D007780
- #Genes/#Species 127/90
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Potri.005G082400.v4.1
- pacid 42804648
- synonym POPTR_0005s08410
Descriptions
- Description PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000373 | ISO | PLAZA Integrative Orthology | Group II intron splicing | Zm00001eb194340 |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT4G39620 |
| GO:0031425 | ISO | PLAZA Integrative Orthology | chloroplast RNA processing | Zm00001eb194340 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0003729 | IEA | InterPro | mRNA binding | |
| GO:0003727 | ISO | PLAZA Integrative Orthology | single-stranded RNA binding | Zm00001eb194340 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |