Gene: SGA_v2.0_scaffold2G01307

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold2G01307
  • Transcript Identifier SGA_v2.0_scaffold2T01307
  • Gene Type Coding gene
  • Location scaffold2 : 4390983-4392992 : positive

Gene Family Information

  • ID HOM05D006414
  • #Genes/#Species 124/89
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Pentatricopeptide repeat-containing protein, putative
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000373
ISO
PLAZA Integrative OrthologyGroup II intron splicing Zm00001eb194340
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT4G39620
GO:0031425
ISO
PLAZA Integrative Orthologychloroplast RNA processing Zm00001eb194340

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003729
IEA
InterPromRNA binding
GO:0003727
ISO
PLAZA Integrative Orthologysingle-stranded RNA binding Zm00001eb194340

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR002885 Pentatricopeptide repeat
IPR044179 Pentatricopeptide repeat-containing protein PPR5-like
Mapman id Description
35.1 not assigned.annotated